STRINGSTRING
CAEBREN_20013 CAEBREN_20013 Cbn-syn-4 Cbn-syn-4 CAEBREN_17793 CAEBREN_17793 CAEBREN_12047 CAEBREN_12047 Cbn-unc-64 Cbn-unc-64 Cbn-syx-2 Cbn-syx-2 Cbn-syx-3 Cbn-syx-3 Cbn-tag-81 Cbn-tag-81 CAEBREN_20885 CAEBREN_20885
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_20013AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1243 aa)
Cbn-syn-4CBN-SYN-4 protein; Belongs to the syntaxin family. (255 aa)
CAEBREN_17793t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (291 aa)
CAEBREN_12047Uncharacterized protein. (283 aa)
Cbn-unc-64CBN-UNC-64 protein; Belongs to the syntaxin family. (293 aa)
Cbn-syx-2CBN-SYX-2 protein. (299 aa)
Cbn-syx-3CBN-SYX-3 protein; Belongs to the syntaxin family. (306 aa)
Cbn-tag-81CBN-TAG-81 protein. (234 aa)
CAEBREN_20885Adaptin_N domain-containing protein. (1223 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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