STRINGSTRING
CAEBREN_30902 CAEBREN_30902 Cbn-tsp-8 Cbn-tsp-8 CAEBREN_17816 CAEBREN_17816 CAEBREN_11829 CAEBREN_11829 CAEBREN_03563 CAEBREN_03563 CAEBREN_16978 CAEBREN_16978 Cbn-pqn-37 Cbn-pqn-37 CAEBREN_10362 CAEBREN_10362
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_30902Uncharacterized protein. (232 aa)
Cbn-tsp-8Tetraspanin. (282 aa)
CAEBREN_17816Uncharacterized protein. (298 aa)
CAEBREN_11829G-patch domain-containing protein. (345 aa)
CAEBREN_03563TPR_REGION domain-containing protein. (624 aa)
CAEBREN_16978Uncharacterized protein. (350 aa)
Cbn-pqn-37CBN-PQN-37 protein. (501 aa)
CAEBREN_10362G-patch domain-containing protein. (522 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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