(51 nodes) Regulation of synapse organization network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_05375	Uncharacterized protein. (376 aa)
	CAEBREN_01416	Uncharacterized protein. (576 aa)
	CAEBREN_05836	Fork-head domain-containing protein. (717 aa)
	CAEBREN_31806	Peptidase_S8 domain-containing protein. (182 aa)
	Cbn-gon-1	CBN-GON-1 protein. (2162 aa)
	CAEBREN_04952	Uncharacterized protein; Belongs to the peptidase C14A family. (500 aa)
	Cbn-egl-21	CBN-EGL-21 protein. (483 aa)
	CAEBREN_04027	Uncharacterized protein. (520 aa)
	CAEBREN_28898	Uncharacterized protein. (475 aa)
	CAEBREN_19257	Ig-like domain-containing protein. (485 aa)
	Cbn-egl-1	CBN-EGL-1 protein. (118 aa)
	CAEBREN_11272	P/Homo B domain-containing protein; Belongs to the peptidase S8 family. (681 aa)
	CAEBREN_12735	Uncharacterized protein. (681 aa)
	Cbn-kpc-1	CBN-KPC-1 protein; Belongs to the peptidase S8 family. (691 aa)
	CAEBREN_07990	Fork-head domain-containing protein. (483 aa)
	Cbn-aex-5	CBN-AEX-5 protein. (424 aa)
	CAEBREN_30513	Uncharacterized protein. (1457 aa)
	CAEBREN_10151	Asp_protease domain-containing protein. (392 aa)
	Cbn-egl-3	CBN-EGL-3 protein; Belongs to the peptidase S8 family. (652 aa)
	CAEBREN_25185	Non-specific serine/threonine protein kinase. (548 aa)
	CAEBREN_08229	Uncharacterized protein. (1851 aa)
	CAEBREN_31826	Protein kinase domain-containing protein. (632 aa)
	CAEBREN_09948	Uncharacterized protein. (612 aa)
	CAEBREN_12103	Uncharacterized protein. (115 aa)
	Cbn-casy-1	CBN-CASY-1 protein. (583 aa)
	CAEBREN_10770	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (826 aa)
	CAEBREN_21692	Uncharacterized protein. (1443 aa)
	Cbn-unc-69	CBN-UNC-69 protein. (108 aa)
	CAEBREN_17699	Uncharacterized protein. (686 aa)
	CAEBREN_22653	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (444 aa)
	Cbn-syd-2	CBN-SYD-2 protein. (1131 aa)
	CAEBREN_13342	CARD domain-containing protein. (567 aa)
	CAEBREN_03212	CARD domain-containing protein. (418 aa)
	Cbn-fsn-1	CBN-FSN-1 protein. (331 aa)
	CAEBREN_29155	CARD domain-containing protein. (547 aa)
	Cbn-ced-4	CBN-CED-4 protein. (568 aa)
	CAEBREN_18199	PPM-type phosphatase domain-containing protein. (311 aa)
	Cbn-cdk-5	CBN-CDK-5 protein; Belongs to the protein kinase superfamily. (308 aa)
	CAEBREN_31025	Uncharacterized protein. (3811 aa)
	CAEBREN_30789	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (805 aa)
	CAEBREN_13710	Uncharacterized protein; Belongs to the peptidase C14A family. (516 aa)
	Cbn-daf-2	CBN-DAF-2 protein. (1937 aa)
	CAEBREN_12732	Uncharacterized protein. (557 aa)
	CAEBREN_28289	Uncharacterized protein. (2157 aa)
	CAEBREN_18760	Uncharacterized protein. (533 aa)
	Cbn-pmk-3	Mitogen-activated protein kinase. (469 aa)
	CAEBREN_29994	Uncharacterized protein. (984 aa)
	CAEBREN_19169	Asp_protease domain-containing protein. (392 aa)
	CAEBREN_28592	MFS domain-containing protein. (555 aa)
	Cbn-unc-40	CBN-UNC-40 protein. (1420 aa)
	CAEBREN_05349	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (365 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_03212	CAEBREN_04952	G0MG22	G0NTE1	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.994
CAEBREN_03212	CAEBREN_13710	G0MG22	G0PJH4	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.994
CAEBREN_03212	CAEBREN_22653	G0MG22	G0MKQ3	CARD domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.494
CAEBREN_03212	Cbn-egl-1	G0MG22	G0NM76	CARD domain-containing protein.	CBN-EGL-1 protein.	0.661
CAEBREN_03212	Cbn-pmk-3	G0MG22	G0PBC1	CARD domain-containing protein.	Mitogen-activated protein kinase.	0.574
CAEBREN_04027	Cbn-syd-2	G0NRS3	G0MI89	Uncharacterized protein.	CBN-SYD-2 protein.	0.593
CAEBREN_04952	CAEBREN_03212	G0NTE1	G0MG22	Uncharacterized protein; Belongs to the peptidase C14A family.	CARD domain-containing protein.	0.994
CAEBREN_04952	CAEBREN_05375	G0NTE1	G0NZ09	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.452
CAEBREN_04952	CAEBREN_08229	G0NTE1	G0N858	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.682
CAEBREN_04952	CAEBREN_11272	G0NTE1	G0NK15	Uncharacterized protein; Belongs to the peptidase C14A family.	P/Homo B domain-containing protein; Belongs to the peptidase S8 family.	0.543
CAEBREN_04952	CAEBREN_13342	G0NTE1	G0MG23	Uncharacterized protein; Belongs to the peptidase C14A family.	CARD domain-containing protein.	0.994
CAEBREN_04952	CAEBREN_17699	G0NTE1	G0ML48	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.511
CAEBREN_04952	CAEBREN_19257	G0NTE1	G0NML0	Uncharacterized protein; Belongs to the peptidase C14A family.	Ig-like domain-containing protein.	0.499
CAEBREN_04952	CAEBREN_21692	G0NTE1	G0MNK6	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.780
CAEBREN_04952	CAEBREN_25185	G0NTE1	G0N913	Uncharacterized protein; Belongs to the peptidase C14A family.	Non-specific serine/threonine protein kinase.	0.867
CAEBREN_04952	CAEBREN_28898	G0NTE1	G0NPU4	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.801
CAEBREN_04952	CAEBREN_29155	G0NTE1	G0MEI2	Uncharacterized protein; Belongs to the peptidase C14A family.	CARD domain-containing protein.	0.994
CAEBREN_04952	CAEBREN_31806	G0NTE1	G0NVC9	Uncharacterized protein; Belongs to the peptidase C14A family.	Peptidase_S8 domain-containing protein.	0.493
CAEBREN_04952	Cbn-aex-5	G0NTE1	G0NCB6	Uncharacterized protein; Belongs to the peptidase C14A family.	CBN-AEX-5 protein.	0.493
CAEBREN_04952	Cbn-ced-4	G0NTE1	G0MEI1	Uncharacterized protein; Belongs to the peptidase C14A family.	CBN-CED-4 protein.	0.994

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