STRINGSTRING
CAEBREN_11647 CAEBREN_11647 CAEBREN_01700 CAEBREN_01700 CAEBREN_17466 CAEBREN_17466 CAEBREN_28462 CAEBREN_28462 Cbn-eat-4 Cbn-eat-4 CAEBREN_29843 CAEBREN_29843 CAEBREN_16239 CAEBREN_16239 CAEBREN_22636 CAEBREN_22636 Cbn-vglu-2 Cbn-vglu-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_11647Uncharacterized protein. (1047 aa)
CAEBREN_01700Uncharacterized protein. (1337 aa)
CAEBREN_17466MFS domain-containing protein. (539 aa)
CAEBREN_28462Carn_acyltransf domain-containing protein. (50 aa)
Cbn-eat-4CBN-EAT-4 protein. (644 aa)
CAEBREN_29843Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (467 aa)
CAEBREN_16239Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (639 aa)
CAEBREN_22636MFS domain-containing protein. (539 aa)
Cbn-vglu-2CBN-VGLU-2 protein. (575 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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