STRINGSTRING
CAEBREN_13342 CAEBREN_13342 Cbn-ced-4 Cbn-ced-4 CAEBREN_29155 CAEBREN_29155 CAEBREN_16954 CAEBREN_16954 CAEBREN_28925 CAEBREN_28925 CAEBREN_13710 CAEBREN_13710 CAEBREN_08746 CAEBREN_08746 CAEBREN_17537 CAEBREN_17537 CAEBREN_04952 CAEBREN_04952 Cbn-cpl-1 Cbn-cpl-1 CAEBREN_08410 CAEBREN_08410 Cbn-cpi-2 Cbn-cpi-2 Cbn-tag-280 Cbn-tag-280 Cbn-tag-281 Cbn-tag-281 CAEBREN_03212 CAEBREN_03212 CAEBREN_02692 CAEBREN_02692
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_13342CARD domain-containing protein. (567 aa)
Cbn-ced-4CBN-CED-4 protein. (568 aa)
CAEBREN_29155CARD domain-containing protein. (547 aa)
CAEBREN_16954Uncharacterized protein. (1422 aa)
CAEBREN_28925Uncharacterized protein; Belongs to the peptidase C1 family. (268 aa)
CAEBREN_13710Uncharacterized protein; Belongs to the peptidase C14A family. (516 aa)
CAEBREN_08746Uncharacterized protein. (1422 aa)
CAEBREN_17537Uncharacterized protein. (393 aa)
CAEBREN_04952Uncharacterized protein; Belongs to the peptidase C14A family. (500 aa)
Cbn-cpl-1CBN-CPL-1 protein; Belongs to the peptidase C1 family. (336 aa)
CAEBREN_08410Uncharacterized protein. (1149 aa)
Cbn-cpi-2CBN-CPI-2 protein. (143 aa)
Cbn-tag-280CBN-TAG-280 protein. (138 aa)
Cbn-tag-281CBN-TAG-281 protein. (147 aa)
CAEBREN_03212CARD domain-containing protein. (418 aa)
CAEBREN_02692Uncharacterized protein. (381 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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