(12 nodes) Contractile ring network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_31493	PH domain-containing protein. (1145 aa)
	Cbn-ani-3	CBN-ANI-3 protein. (777 aa)
	Cbn-cyk-1	CBN-CYK-1 protein. (1444 aa)
	Cbn-nmy-2	CBN-NMY-2 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2003 aa)
	CAEBREN_23287	PH domain-containing protein. (1748 aa)
	CAEBREN_04060	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (168 aa)
	CAEBREN_08737	PH domain-containing protein. (993 aa)
	CAEBREN_01678	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (297 aa)
	CAEBREN_21448	PH domain-containing protein. (993 aa)
	CAEBREN_29365	Uncharacterized protein. (388 aa)
	CAEBREN_06770	PH domain-containing protein. (470 aa)
	CAEBREN_05138	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (338 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_01678	CAEBREN_08737	G0PBP2	G0MZL7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.610
CAEBREN_01678	CAEBREN_21448	G0PBP2	G0PE52	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.610
CAEBREN_01678	CAEBREN_29365	G0PBP2	G0PIF2	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.651
CAEBREN_01678	CAEBREN_31493	G0PBP2	G0N600	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.651
CAEBREN_01678	Cbn-ani-3	G0PBP2	G0N0V3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-ANI-3 protein.	0.436
CAEBREN_01678	Cbn-cyk-1	G0PBP2	G0MEQ9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-CYK-1 protein.	0.598
CAEBREN_04060	CAEBREN_08737	G0P1D8	G0MZL7	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.610
CAEBREN_04060	CAEBREN_21448	G0P1D8	G0PE52	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.610
CAEBREN_04060	CAEBREN_29365	G0P1D8	G0PIF2	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.651
CAEBREN_04060	CAEBREN_31493	G0P1D8	G0N600	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.651
CAEBREN_04060	Cbn-ani-3	G0P1D8	G0N0V3	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-ANI-3 protein.	0.436
CAEBREN_04060	Cbn-cyk-1	G0P1D8	G0MEQ9	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-CYK-1 protein.	0.598
CAEBREN_05138	CAEBREN_08737	G0N6P3	G0MZL7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.610
CAEBREN_05138	CAEBREN_21448	G0N6P3	G0PE52	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.610
CAEBREN_05138	CAEBREN_29365	G0N6P3	G0PIF2	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.651
CAEBREN_05138	CAEBREN_31493	G0N6P3	G0N600	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.651
CAEBREN_05138	Cbn-ani-3	G0N6P3	G0N0V3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-ANI-3 protein.	0.436
CAEBREN_05138	Cbn-cyk-1	G0N6P3	G0MEQ9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-CYK-1 protein.	0.598
CAEBREN_06770	CAEBREN_08737	G0MGX8	G0MZL7	PH domain-containing protein.	PH domain-containing protein.	0.605
CAEBREN_06770	CAEBREN_21448	G0MGX8	G0PE52	PH domain-containing protein.	PH domain-containing protein.	0.605

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