(34 nodes) Mitotic spindle assembly network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbn-cls-3	CBN-CLS-3 protein. (920 aa)
	Cbn-air-2	CBN-AIR-2 protein; Belongs to the protein kinase superfamily. (365 aa)
	CAEBREN_14343	Uncharacterized protein. (521 aa)
	CAEBREN_00019	INCENP_ARK-bind domain-containing protein. (297 aa)
	CAEBREN_32604	Uncharacterized protein. (493 aa)
	Cbn-cls-1	CBN-CLS-1 protein. (1365 aa)
	CAEBREN_02388	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (565 aa)
	CAEBREN_01763	Uncharacterized protein. (680 aa)
	Cbn-bmk-1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (959 aa)
	CAEBREN_20398	ASH domain-containing protein. (830 aa)
	CAEBREN_01857	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (745 aa)
	CAEBREN_29150	Uncharacterized protein. (92 aa)
	CAEBREN_14013	Uncharacterized protein. (259 aa)
	CAEBREN_30625	Uncharacterized protein. (364 aa)
	CAEBREN_00197	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (565 aa)
	CAEBREN_19638	BED-type domain-containing protein. (328 aa)
	CAEBREN_26146	Uncharacterized protein. (521 aa)
	CAEBREN_30006	INCENP_ARK-bind domain-containing protein. (629 aa)
	CAEBREN_31302	Protein kinase domain-containing protein. (128 aa)
	Cbn-hcp-4	CBN-HCP-4 protein. (894 aa)
	CAEBREN_30532	Uncharacterized protein. (895 aa)
	CAEBREN_20594	TYR_PHOSPHATASE_2 domain-containing protein. (613 aa)
	CAEBREN_25800	Uncharacterized protein. (680 aa)
	CAEBREN_29465	Protein kinase domain-containing protein. (120 aa)
	CAEBREN_12258	Uncharacterized protein. (161 aa)
	Cbn-air-1	CBN-AIR-1 protein; Belongs to the protein kinase superfamily. (328 aa)
	CAEBREN_08938	TYR_PHOSPHATASE_2 domain-containing protein. (613 aa)
	CAEBREN_29260	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (626 aa)
	CAEBREN_19694	Uncharacterized protein. (368 aa)
	Cbn-che-12	CBN-CHE-12 protein. (1190 aa)
	CAEBREN_02770	Uncharacterized protein. (150 aa)
	CAEBREN_06233	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (565 aa)
	Cbn-cyk-4	CBN-CYK-4 protein. (679 aa)
	Cbn-cls-2	CBN-CLS-2 protein. (1021 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00019	CAEBREN_00197	G0MFU8	G0P5H5	INCENP_ARK-bind domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.506
CAEBREN_00019	CAEBREN_01857	G0MFU8	G0NW18	INCENP_ARK-bind domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.895
CAEBREN_00019	CAEBREN_02388	G0MFU8	G0NML7	INCENP_ARK-bind domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.506
CAEBREN_00019	CAEBREN_02770	G0MFU8	G0N6H6	INCENP_ARK-bind domain-containing protein.	Uncharacterized protein.	0.977
CAEBREN_00019	CAEBREN_06233	G0MFU8	G0MPC3	INCENP_ARK-bind domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.506
CAEBREN_00019	CAEBREN_12258	G0MFU8	G0NH34	INCENP_ARK-bind domain-containing protein.	Uncharacterized protein.	0.977
CAEBREN_00019	CAEBREN_14343	G0MFU8	G0NMH9	INCENP_ARK-bind domain-containing protein.	Uncharacterized protein.	0.742
CAEBREN_00019	CAEBREN_20398	G0MFU8	G0NUT6	INCENP_ARK-bind domain-containing protein.	ASH domain-containing protein.	0.643
CAEBREN_00019	CAEBREN_26146	G0MFU8	G0P816	INCENP_ARK-bind domain-containing protein.	Uncharacterized protein.	0.742
CAEBREN_00019	CAEBREN_29150	G0MFU8	G0NXR8	INCENP_ARK-bind domain-containing protein.	Uncharacterized protein.	0.635
CAEBREN_00019	CAEBREN_29260	G0MFU8	G0NA21	INCENP_ARK-bind domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.895
CAEBREN_00019	CAEBREN_29465	G0MFU8	G0NLH5	INCENP_ARK-bind domain-containing protein.	Protein kinase domain-containing protein.	0.984
CAEBREN_00019	CAEBREN_31302	G0MFU8	G0PE03	INCENP_ARK-bind domain-containing protein.	Protein kinase domain-containing protein.	0.984
CAEBREN_00019	Cbn-air-1	G0MFU8	G0NE56	INCENP_ARK-bind domain-containing protein.	CBN-AIR-1 protein; Belongs to the protein kinase superfamily.	0.944
CAEBREN_00019	Cbn-air-2	G0MFU8	G0MIM4	INCENP_ARK-bind domain-containing protein.	CBN-AIR-2 protein; Belongs to the protein kinase superfamily.	0.984
CAEBREN_00019	Cbn-bmk-1	G0MFU8	G0NQ33	INCENP_ARK-bind domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.832
CAEBREN_00019	Cbn-cyk-4	G0MFU8	G0ML50	INCENP_ARK-bind domain-containing protein.	CBN-CYK-4 protein.	0.826
CAEBREN_00197	CAEBREN_00019	G0P5H5	G0MFU8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	INCENP_ARK-bind domain-containing protein.	0.506
CAEBREN_00197	CAEBREN_01763	G0P5H5	G0NPS9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.548
CAEBREN_00197	CAEBREN_01857	G0P5H5	G0NW18	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.802

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