(18 nodes) Eukaryotic translation initiation factor 4F complex network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_17063	Uncharacterized protein. (415 aa)
	CAEBREN_08981	MIF4G domain-containing protein. (245 aa)
	CAEBREN_24130	Uncharacterized protein. (486 aa)
	CAEBREN_24701	Uncharacterized protein. (850 aa)
	CAEBREN_19695	Uncharacterized protein; Belongs to the DEAD box helicase family. (402 aa)
	CAEBREN_06394	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (212 aa)
	CAEBREN_31007	MIF4G domain-containing protein. (1178 aa)
	CAEBREN_31956	OTU domain-containing protein. (151 aa)
	Cbn-ife-3	CBN-IFE-3 protein; Belongs to the eukaryotic initiation factor 4E family. (243 aa)
	CAEBREN_12788	Uncharacterized protein. (396 aa)
	CAEBREN_05168	Uncharacterized protein. (1169 aa)
	CAEBREN_09035	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (233 aa)
	CAEBREN_28817	Uncharacterized protein. (114 aa)
	CAEBREN_16996	Uncharacterized protein. (114 aa)
	CAEBREN_30236	OTU domain-containing protein. (341 aa)
	CAEBREN_00329	Uncharacterized protein. (296 aa)
	Cbn-ife-4	CBN-IFE-4 protein; Belongs to the eukaryotic initiation factor 4E family. (215 aa)
	Cbn-ifg-1	CBN-IFG-1 protein. (1174 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00329	CAEBREN_06394	G0PFM0	G0MCD5	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.895
CAEBREN_00329	CAEBREN_09035	G0PFM0	G0P3C1	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.895
CAEBREN_00329	CAEBREN_19695	G0PFM0	G0MET1	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.967
CAEBREN_00329	CAEBREN_24701	G0PFM0	G0MVT6	Uncharacterized protein.	Uncharacterized protein.	0.722
CAEBREN_00329	Cbn-ife-3	G0PFM0	G0PFQ7	Uncharacterized protein.	CBN-IFE-3 protein; Belongs to the eukaryotic initiation factor 4E family.	0.895
CAEBREN_00329	Cbn-ife-4	G0PFM0	G0N7S0	Uncharacterized protein.	CBN-IFE-4 protein; Belongs to the eukaryotic initiation factor 4E family.	0.778
CAEBREN_05168	CAEBREN_06394	G0P4K6	G0MCD5	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.895
CAEBREN_05168	CAEBREN_09035	G0P4K6	G0P3C1	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.895
CAEBREN_05168	CAEBREN_19695	G0P4K6	G0MET1	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.967
CAEBREN_05168	CAEBREN_24701	G0P4K6	G0MVT6	Uncharacterized protein.	Uncharacterized protein.	0.722
CAEBREN_05168	Cbn-ife-3	G0P4K6	G0PFQ7	Uncharacterized protein.	CBN-IFE-3 protein; Belongs to the eukaryotic initiation factor 4E family.	0.895
CAEBREN_05168	Cbn-ife-4	G0P4K6	G0N7S0	Uncharacterized protein.	CBN-IFE-4 protein; Belongs to the eukaryotic initiation factor 4E family.	0.778
CAEBREN_06394	CAEBREN_00329	G0MCD5	G0PFM0	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.895
CAEBREN_06394	CAEBREN_05168	G0MCD5	G0P4K6	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.895
CAEBREN_06394	CAEBREN_08981	G0MCD5	G0N428	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	MIF4G domain-containing protein.	0.973
CAEBREN_06394	CAEBREN_09035	G0MCD5	G0P3C1	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.767
CAEBREN_06394	CAEBREN_17063	G0MCD5	G0N429	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.973
CAEBREN_06394	CAEBREN_19695	G0MCD5	G0MET1	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.962
CAEBREN_06394	CAEBREN_24130	G0MCD5	G0MZ96	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.903
CAEBREN_06394	CAEBREN_24701	G0MCD5	G0MVT6	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.779

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