(10 nodes) CRIB domain network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbn-pak-1	Non-specific serine/threonine protein kinase. (570 aa)
	Cbn-ark-1	CBN-ARK-1 protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1053 aa)
	CAEBREN_00370	Non-specific serine/threonine protein kinase. (523 aa)
	Cbn-wsp-1	CBN-WSP-1 protein. (596 aa)
	CAEBREN_30369	Uncharacterized protein. (766 aa)
	Cbn-max-2	CBN-MAX-2 protein. (257 aa)
	CAEBREN_28466	Non-specific serine/threonine protein kinase. (523 aa)
	CAEBREN_26040	CRIB domain-containing protein. (276 aa)
	CAEBREN_30261	CRIB domain-containing protein. (599 aa)
	Cbn-mrck-1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1590 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00370	CAEBREN_30369	G0N8G4	G0PBB4	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.612
CAEBREN_00370	Cbn-max-2	G0N8G4	G0PDC8	Non-specific serine/threonine protein kinase.	CBN-MAX-2 protein.	0.903
CAEBREN_00370	Cbn-mrck-1	G0N8G4	G0MXR2	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.677
CAEBREN_00370	Cbn-pak-1	G0N8G4	G0MT05	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.909
CAEBREN_00370	Cbn-wsp-1	G0N8G4	G0P5P0	Non-specific serine/threonine protein kinase.	CBN-WSP-1 protein.	0.612
CAEBREN_26040	CAEBREN_30261	G0MJX7	G0MPL0	CRIB domain-containing protein.	CRIB domain-containing protein.	0.983
CAEBREN_28466	CAEBREN_30369	G0PNA9	G0PBB4	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.612
CAEBREN_28466	Cbn-max-2	G0PNA9	G0PDC8	Non-specific serine/threonine protein kinase.	CBN-MAX-2 protein.	0.903
CAEBREN_28466	Cbn-mrck-1	G0PNA9	G0MXR2	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.677
CAEBREN_28466	Cbn-pak-1	G0PNA9	G0MT05	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.909
CAEBREN_28466	Cbn-wsp-1	G0PNA9	G0P5P0	Non-specific serine/threonine protein kinase.	CBN-WSP-1 protein.	0.612
CAEBREN_30261	CAEBREN_26040	G0MPL0	G0MJX7	CRIB domain-containing protein.	CRIB domain-containing protein.	0.983
CAEBREN_30369	CAEBREN_00370	G0PBB4	G0N8G4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.612
CAEBREN_30369	CAEBREN_28466	G0PBB4	G0PNA9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.612
CAEBREN_30369	Cbn-max-2	G0PBB4	G0PDC8	Uncharacterized protein.	CBN-MAX-2 protein.	0.719
CAEBREN_30369	Cbn-mrck-1	G0PBB4	G0MXR2	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.608
CAEBREN_30369	Cbn-pak-1	G0PBB4	G0MT05	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.660
Cbn-max-2	CAEBREN_00370	G0PDC8	G0N8G4	CBN-MAX-2 protein.	Non-specific serine/threonine protein kinase.	0.903
Cbn-max-2	CAEBREN_28466	G0PDC8	G0PNA9	CBN-MAX-2 protein.	Non-specific serine/threonine protein kinase.	0.903
Cbn-max-2	CAEBREN_30369	G0PDC8	G0PBB4	CBN-MAX-2 protein.	Uncharacterized protein.	0.719

page 1 of 2

Server load: low (8%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About