STRINGSTRING
Cbn-unc-44 Cbn-unc-44 CAEBREN_20778 CAEBREN_20778 Cbn-ikb-1 Cbn-ikb-1 CAEBREN_16590 CAEBREN_16590 CAEBREN_00313 CAEBREN_00313 CAEBREN_17200 CAEBREN_17200 Cbn-dapk-1 Cbn-dapk-1 CAEBREN_31766 CAEBREN_31766
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-unc-44CBN-UNC-44 protein. (808 aa)
CAEBREN_20778Uncharacterized protein. (811 aa)
Cbn-ikb-1CBN-IKB-1 protein. (597 aa)
CAEBREN_16590Uncharacterized protein. (1806 aa)
CAEBREN_00313Uncharacterized protein. (811 aa)
CAEBREN_17200ANK_REP_REGION domain-containing protein. (597 aa)
Cbn-dapk-1CBN-DAPK-1 protein. (1104 aa)
CAEBREN_31766Uncharacterized protein. (1718 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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