(15 nodes) Histidine phosphatase superfamily, clade-1 network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_23820	Uncharacterized protein. (221 aa)
	CAEBREN_09343	6PF2K domain-containing protein. (450 aa)
	CAEBREN_18642	Uncharacterized protein. (301 aa)
	CAEBREN_03656	Uncharacterized protein. (227 aa)
	CAEBREN_06119	6PF2K domain-containing protein. (457 aa)
	CAEBREN_02804	Uncharacterized protein. (221 aa)
	CAEBREN_14132	Uncharacterized protein. (315 aa)
	CAEBREN_22684	Uncharacterized protein. (314 aa)
	CAEBREN_05609	Uncharacterized protein. (287 aa)
	CAEBREN_14631	Uncharacterized protein. (305 aa)
	CAEBREN_11597	Uncharacterized protein. (226 aa)
	CAEBREN_02341	6PF2K domain-containing protein. (345 aa)
	CAEBREN_12170	6PF2K domain-containing protein. (223 aa)
	CAEBREN_09464	Uncharacterized protein. (315 aa)
	CAEBREN_14254	Uncharacterized protein. (287 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_02341	CAEBREN_06119	G0P8K7	G0NVZ7	6PF2K domain-containing protein.	6PF2K domain-containing protein.	0.703
CAEBREN_06119	CAEBREN_02341	G0NVZ7	G0P8K7	6PF2K domain-containing protein.	6PF2K domain-containing protein.	0.703
CAEBREN_06119	CAEBREN_09343	G0NVZ7	G0MF57	6PF2K domain-containing protein.	6PF2K domain-containing protein.	0.703
CAEBREN_06119	CAEBREN_12170	G0NVZ7	G0P8K6	6PF2K domain-containing protein.	6PF2K domain-containing protein.	0.715
CAEBREN_09343	CAEBREN_06119	G0MF57	G0NVZ7	6PF2K domain-containing protein.	6PF2K domain-containing protein.	0.703
CAEBREN_09464	CAEBREN_11597	G0NXS4	G0P9V6	Uncharacterized protein.	Uncharacterized protein.	0.429
CAEBREN_11597	CAEBREN_09464	G0P9V6	G0NXS4	Uncharacterized protein.	Uncharacterized protein.	0.429
CAEBREN_11597	CAEBREN_14132	G0P9V6	G0NUU1	Uncharacterized protein.	Uncharacterized protein.	0.483
CAEBREN_12170	CAEBREN_06119	G0P8K6	G0NVZ7	6PF2K domain-containing protein.	6PF2K domain-containing protein.	0.715
CAEBREN_14132	CAEBREN_11597	G0NUU1	G0P9V6	Uncharacterized protein.	Uncharacterized protein.	0.483

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