(27 nodes) FERM/acyl-CoA-binding protein superfamily network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_02274	ACB domain-containing protein. (143 aa)
	Cbn-acbp-5	CBN-ACBP-5 protein. (275 aa)
	Cbn-frm-2	CBN-FRM-2 protein. (316 aa)
	Cbn-kin-32	CBN-KIN-32 protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (866 aa)
	Cbn-frm-8	CBN-FRM-8 protein. (839 aa)
	Cbn-frm-3	CBN-FRM-3 protein. (1089 aa)
	Cbn-hum-6	CBN-HUM-6 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2100 aa)
	CAEBREN_23237	ACB domain-containing protein. (116 aa)
	CAEBREN_32023	FERM domain-containing protein. (633 aa)
	CAEBREN_28856	FERM domain-containing protein. (390 aa)
	CAEBREN_22364	FERM domain-containing protein. (318 aa)
	Cbn-acbp-1	CBN-ACBP-1 protein. (86 aa)
	CAEBREN_29602	FERM domain-containing protein. (516 aa)
	CAEBREN_18521	Uncharacterized protein. (426 aa)
	Cbn-ech-4	CBN-ECH-4 protein. (385 aa)
	Cbn-frm-10	CBN-FRM-10 protein. (753 aa)
	CAEBREN_31850	FERM domain-containing protein. (998 aa)
	CAEBREN_13859	ACB domain-containing protein. (161 aa)
	Cbn-erm-1	CBN-ERM-1 protein. (563 aa)
	Cbn-frm-4	CBN-FRM-4 protein. (643 aa)
	Cbn-maa-1	CBN-MAA-1 protein. (259 aa)
	CAEBREN_31589	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (1001 aa)
	CAEBREN_13273	Uncharacterized protein. (1099 aa)
	CAEBREN_00777	FERM domain-containing protein. (3311 aa)
	CAEBREN_28982	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (884 aa)
	Cbn-acbp-6	CBN-ACBP-6 protein. (196 aa)
	Cbn-frm-1	CBN-FRM-1 protein. (482 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00777	CAEBREN_22364	G0NCH7	G0PFU2	FERM domain-containing protein.	FERM domain-containing protein.	0.477
CAEBREN_00777	CAEBREN_29602	G0NCH7	G0NVJ3	FERM domain-containing protein.	FERM domain-containing protein.	0.519
CAEBREN_00777	CAEBREN_32023	G0NCH7	G0N2N7	FERM domain-containing protein.	FERM domain-containing protein.	0.519
CAEBREN_00777	Cbn-erm-1	G0NCH7	G0NHD6	FERM domain-containing protein.	CBN-ERM-1 protein.	0.519
CAEBREN_00777	Cbn-frm-10	G0NCH7	G0MSE4	FERM domain-containing protein.	CBN-FRM-10 protein.	0.579
CAEBREN_00777	Cbn-frm-2	G0NCH7	G0MLJ2	FERM domain-containing protein.	CBN-FRM-2 protein.	0.695
CAEBREN_00777	Cbn-frm-4	G0NCH7	G0NKB3	FERM domain-containing protein.	CBN-FRM-4 protein.	0.708
CAEBREN_00777	Cbn-frm-8	G0NCH7	G0MWR0	FERM domain-containing protein.	CBN-FRM-8 protein.	0.579
CAEBREN_00777	Cbn-hum-6	G0NCH7	G0M783	FERM domain-containing protein.	CBN-HUM-6 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.520
CAEBREN_13859	Cbn-acbp-1	G0NGT4	B6VBA2	ACB domain-containing protein.	CBN-ACBP-1 protein.	0.718
CAEBREN_13859	Cbn-acbp-5	G0NGT4	G0ML66	ACB domain-containing protein.	CBN-ACBP-5 protein.	0.983
CAEBREN_13859	Cbn-acbp-6	G0NGT4	G0NZU9	ACB domain-containing protein.	CBN-ACBP-6 protein.	0.917
CAEBREN_13859	Cbn-ech-4	G0NGT4	G0MVI9	ACB domain-containing protein.	CBN-ECH-4 protein.	0.529
CAEBREN_13859	Cbn-hum-6	G0NGT4	G0M783	ACB domain-containing protein.	CBN-HUM-6 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.508
CAEBREN_18521	Cbn-acbp-1	G0NDU7	B6VBA2	Uncharacterized protein.	CBN-ACBP-1 protein.	0.508
CAEBREN_18521	Cbn-acbp-5	G0NDU7	G0ML66	Uncharacterized protein.	CBN-ACBP-5 protein.	0.502
CAEBREN_22364	CAEBREN_00777	G0PFU2	G0NCH7	FERM domain-containing protein.	FERM domain-containing protein.	0.477
CAEBREN_22364	CAEBREN_28856	G0PFU2	G0PND4	FERM domain-containing protein.	FERM domain-containing protein.	0.560
CAEBREN_22364	CAEBREN_31589	G0PFU2	G0N5R3	FERM domain-containing protein.	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	0.664
CAEBREN_22364	Cbn-frm-1	G0PFU2	G0NZM5	FERM domain-containing protein.	CBN-FRM-1 protein.	0.477

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