(13 nodes) FERM, N-terminal network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbn-frm-2	CBN-FRM-2 protein. (316 aa)
	CAEBREN_20497	Uncharacterized protein. (1487 aa)
	Cbn-frm-1	CBN-FRM-1 protein. (482 aa)
	CAEBREN_29602	FERM domain-containing protein. (516 aa)
	Cbn-frm-4	CBN-FRM-4 protein. (643 aa)
	Cbn-erm-1	CBN-ERM-1 protein. (563 aa)
	CAEBREN_00777	FERM domain-containing protein. (3311 aa)
	CAEBREN_32023	FERM domain-containing protein. (633 aa)
	CAEBREN_22364	FERM domain-containing protein. (318 aa)
	CAEBREN_28856	FERM domain-containing protein. (390 aa)
	CAEBREN_02087	FERM domain-containing protein. (979 aa)
	CAEBREN_32076	FERM domain-containing protein. (98 aa)
	Cbn-frm-3	CBN-FRM-3 protein. (1089 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00777	CAEBREN_22364	G0NCH7	G0PFU2	FERM domain-containing protein.	FERM domain-containing protein.	0.477
CAEBREN_00777	CAEBREN_29602	G0NCH7	G0NVJ3	FERM domain-containing protein.	FERM domain-containing protein.	0.519
CAEBREN_00777	CAEBREN_32023	G0NCH7	G0N2N7	FERM domain-containing protein.	FERM domain-containing protein.	0.519
CAEBREN_00777	CAEBREN_32076	G0NCH7	G0P9Q8	FERM domain-containing protein.	FERM domain-containing protein.	0.477
CAEBREN_00777	Cbn-erm-1	G0NCH7	G0NHD6	FERM domain-containing protein.	CBN-ERM-1 protein.	0.519
CAEBREN_00777	Cbn-frm-2	G0NCH7	G0MLJ2	FERM domain-containing protein.	CBN-FRM-2 protein.	0.695
CAEBREN_00777	Cbn-frm-4	G0NCH7	G0NKB3	FERM domain-containing protein.	CBN-FRM-4 protein.	0.708
CAEBREN_02087	CAEBREN_22364	G0MP57	G0PFU2	FERM domain-containing protein.	FERM domain-containing protein.	0.560
CAEBREN_02087	CAEBREN_29602	G0MP57	G0NVJ3	FERM domain-containing protein.	FERM domain-containing protein.	0.843
CAEBREN_02087	CAEBREN_32023	G0MP57	G0N2N7	FERM domain-containing protein.	FERM domain-containing protein.	0.957
CAEBREN_02087	CAEBREN_32076	G0MP57	G0P9Q8	FERM domain-containing protein.	FERM domain-containing protein.	0.560
CAEBREN_02087	Cbn-erm-1	G0MP57	G0NHD6	FERM domain-containing protein.	CBN-ERM-1 protein.	0.843
CAEBREN_20497	CAEBREN_22364	G0P7F3	G0PFU2	Uncharacterized protein.	FERM domain-containing protein.	0.560
CAEBREN_20497	CAEBREN_29602	G0P7F3	G0NVJ3	Uncharacterized protein.	FERM domain-containing protein.	0.560
CAEBREN_20497	CAEBREN_32023	G0P7F3	G0N2N7	Uncharacterized protein.	FERM domain-containing protein.	0.779
CAEBREN_20497	CAEBREN_32076	G0P7F3	G0P9Q8	Uncharacterized protein.	FERM domain-containing protein.	0.560
CAEBREN_20497	Cbn-erm-1	G0P7F3	G0NHD6	Uncharacterized protein.	CBN-ERM-1 protein.	0.560
CAEBREN_20497	Cbn-frm-3	G0P7F3	G0M6T8	Uncharacterized protein.	CBN-FRM-3 protein.	0.568
CAEBREN_22364	CAEBREN_00777	G0PFU2	G0NCH7	FERM domain-containing protein.	FERM domain-containing protein.	0.477
CAEBREN_22364	CAEBREN_02087	G0PFU2	G0MP57	FERM domain-containing protein.	FERM domain-containing protein.	0.560

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