STRINGSTRING
Cbn-apm-3 Cbn-apm-3 Cbn-dpy-23 Cbn-dpy-23 Cbn-aps-2 Cbn-aps-2 CAEBREN_06250 CAEBREN_06250 Cbn-aps-1 Cbn-aps-1 CAEBREN_08328 CAEBREN_08328 CAEBREN_16898 CAEBREN_16898 Cbn-aps-3 Cbn-aps-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-apm-3CBN-APM-3 protein; Belongs to the adaptor complexes medium subunit family. (414 aa)
Cbn-dpy-23CBN-DPY-23 protein; Belongs to the adaptor complexes medium subunit family. (435 aa)
Cbn-aps-2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
CAEBREN_06250Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (184 aa)
Cbn-aps-1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
CAEBREN_08328MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (422 aa)
CAEBREN_16898MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (426 aa)
Cbn-aps-3CBN-APS-3 protein. (192 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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