(14 nodes) Anaphase-promoting complex subunit 4, WD40 domain network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	Cbn-fzr-1	CBN-FZR-1 protein. (519 aa)
	CAEBREN_28131	Uncharacterized protein. (322 aa)
	CAEBREN_23218	WD_REPEATS_REGION domain-containing protein. (433 aa)
	CAEBREN_08468	ANAPC4_WD40 domain-containing protein. (523 aa)
	CAEBREN_18767	Uncharacterized protein. (1169 aa)
	CAEBREN_15336	ANAPC4_WD40 domain-containing protein. (660 aa)
	Cbn-unc-78	CBN-UNC-78 protein. (611 aa)
	Cbn-ifta-1	CBN-IFTA-1 protein. (1074 aa)
	Cbn-emb-30	CBN-EMB-30 protein. (1013 aa)
	Cbn-dyf-2	CBN-DYF-2 protein. (681 aa)
	CAEBREN_28067	WD_REPEATS_REGION domain-containing protein. (708 aa)
	CAEBREN_31678	WD_REPEATS_REGION domain-containing protein. (437 aa)
	CAEBREN_10200	WD_REPEATS_REGION domain-containing protein. (450 aa)
	CAEBREN_23389	WD_REPEATS_REGION domain-containing protein. (902 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_08468	CAEBREN_28067	G0NPA7	G0PFU7	ANAPC4_WD40 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.731
CAEBREN_08468	Cbn-dyf-2	G0NPA7	G0ML35	ANAPC4_WD40 domain-containing protein.	CBN-DYF-2 protein.	0.959
CAEBREN_08468	Cbn-fzr-1	G0NPA7	G0N3Q4	ANAPC4_WD40 domain-containing protein.	CBN-FZR-1 protein.	0.731
CAEBREN_10200	CAEBREN_28067	G0MZF8	G0PFU7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.521
CAEBREN_10200	CAEBREN_28131	G0MZF8	G0NG86	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.978
CAEBREN_10200	CAEBREN_31678	G0MZF8	G0NZF6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.662
CAEBREN_10200	Cbn-fzr-1	G0MZF8	G0N3Q4	WD_REPEATS_REGION domain-containing protein.	CBN-FZR-1 protein.	0.521
CAEBREN_15336	CAEBREN_28067	G0NSP0	G0PFU7	ANAPC4_WD40 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.731
CAEBREN_15336	Cbn-dyf-2	G0NSP0	G0ML35	ANAPC4_WD40 domain-containing protein.	CBN-DYF-2 protein.	0.961
CAEBREN_15336	Cbn-fzr-1	G0NSP0	G0N3Q4	ANAPC4_WD40 domain-containing protein.	CBN-FZR-1 protein.	0.731
CAEBREN_28067	CAEBREN_08468	G0PFU7	G0NPA7	WD_REPEATS_REGION domain-containing protein.	ANAPC4_WD40 domain-containing protein.	0.731
CAEBREN_28067	CAEBREN_10200	G0PFU7	G0MZF8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.521
CAEBREN_28067	CAEBREN_15336	G0PFU7	G0NSP0	WD_REPEATS_REGION domain-containing protein.	ANAPC4_WD40 domain-containing protein.	0.731
CAEBREN_28067	CAEBREN_28131	G0PFU7	G0NG86	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.774
CAEBREN_28067	Cbn-dyf-2	G0PFU7	G0ML35	WD_REPEATS_REGION domain-containing protein.	CBN-DYF-2 protein.	0.827
CAEBREN_28067	Cbn-ifta-1	G0PFU7	G0M8R5	WD_REPEATS_REGION domain-containing protein.	CBN-IFTA-1 protein.	0.731
CAEBREN_28131	CAEBREN_10200	G0NG86	G0MZF8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.978
CAEBREN_28131	CAEBREN_28067	G0NG86	G0PFU7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.774
CAEBREN_28131	Cbn-fzr-1	G0NG86	G0N3Q4	Uncharacterized protein.	CBN-FZR-1 protein.	0.790
CAEBREN_31678	CAEBREN_10200	G0NZF6	G0MZF8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.662

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