(35 nodes) AAA ATPase, AAA+ lid domain network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mei-1	Meiotic spindle formation protein mei-1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays. This activity may promote rapid reorganization of cellular microtubule arrays. Required specifically for meiotic spindle formation in the female germline; the presence of this protein is inimical to the formation of mitotic spindles. (470 aa)
	Cbn-rpt-4	CBN-RPT-4 protein; Belongs to the AAA ATPase family. (398 aa)
	CAEBREN_11672	Uncharacterized protein. (714 aa)
	Cbn-ymel-1	CBN-YMEL-1 protein. (712 aa)
	Cbn-rpt-3	CBN-RPT-3 protein; Belongs to the AAA ATPase family. (419 aa)
	CAEBREN_14744	AAA domain-containing protein; Belongs to the AAA ATPase family. (595 aa)
	Cbn-cdc-48.1	CBN-CDC-48.1 protein; Belongs to the AAA ATPase family. (844 aa)
	CAEBREN_12205	AAA domain-containing protein; Belongs to the AAA ATPase family. (443 aa)
	Cbn-mac-1	CBN-MAC-1 protein. (831 aa)
	Cbn-ppgn-1	CBN-PPGN-1 protein. (743 aa)
	CAEBREN_11323	AAA domain-containing protein; Belongs to the AAA ATPase family. (371 aa)
	CAEBREN_16611	AAA domain-containing protein; Belongs to the AAA ATPase family. (417 aa)
	CAEBREN_04435	AAA domain-containing protein; Belongs to the AAA ATPase family. (268 aa)
	CAEBREN_19051	AAA domain-containing protein; Belongs to the AAA ATPase family. (416 aa)
	CAEBREN_26093	AAA domain-containing protein; Belongs to the AAA ATPase family. (438 aa)
	CAEBREN_09100	AAA domain-containing protein; Belongs to the AAA ATPase family. (418 aa)
	CAEBREN_06297	AAA domain-containing protein; Belongs to the AAA ATPase family. (298 aa)
	CAEBREN_16307	AAA domain-containing protein; Belongs to the AAA ATPase family. (411 aa)
	CAEBREN_12847	AAA domain-containing protein; Belongs to the AAA ATPase family. (411 aa)
	CAEBREN_25656	AAA domain-containing protein; Belongs to the AAA ATPase family. (448 aa)
	Cbn-rpt-1	CBN-RPT-1 protein; Belongs to the AAA ATPase family. (435 aa)
	CAEBREN_25573	Uncharacterized protein. (755 aa)
	Cbn-cdc-48.2	CBN-CDC-48.2 protein; Belongs to the AAA ATPase family. (814 aa)
	CAEBREN_20979	Uncharacterized protein. (755 aa)
	CAEBREN_07013	Uncharacterized protein. (831 aa)
	Cbn-spg-7	CBN-SPG-7 protein. (779 aa)
	Cbn-rpt-5	CBN-RPT-5 protein; Belongs to the AAA ATPase family. (431 aa)
	CAEBREN_08050	Uncharacterized protein. (713 aa)
	CAEBREN_01008	AAA domain-containing protein; Belongs to the AAA ATPase family. (298 aa)
	CAEBREN_10399	AAA domain-containing protein; Belongs to the AAA ATPase family. (416 aa)
	CAEBREN_09873	Uncharacterized protein. (755 aa)
	CAEBREN_15387	Uncharacterized protein. (755 aa)
	CAEBREN_30244	AAA domain-containing protein; Belongs to the AAA ATPase family. (613 aa)
	mei-1-2	Meiotic spindle formation protein mei-1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays. This activity may promote rapid reorganization of cellular microtubule arrays. Required specifically for meiotic spindle formation in the female germline; the presence of this protein is inimical to the formation of mitotic spindles. (473 aa)
	CAEBREN_30884	AAA domain-containing protein. (850 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_01008	CAEBREN_07013	G0P824	G0PFS8	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.555
CAEBREN_01008	CAEBREN_08050	G0P824	G0PAK6	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.572
CAEBREN_01008	CAEBREN_09873	G0P824	G0P5F4	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.563
CAEBREN_01008	CAEBREN_10399	G0P824	G0P7N1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.436
CAEBREN_01008	CAEBREN_11323	G0P824	G0N216	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.579
CAEBREN_01008	CAEBREN_11672	G0P824	G0MFQ1	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.572
CAEBREN_01008	CAEBREN_12205	G0P824	G0MXN0	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.444
CAEBREN_01008	CAEBREN_12847	G0P824	G0NTT2	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.436
CAEBREN_01008	CAEBREN_14744	G0P824	G0MTG2	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.691
CAEBREN_01008	CAEBREN_15387	G0P824	G0P5F3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.563
CAEBREN_01008	CAEBREN_16307	G0P824	G0NTS9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.436
CAEBREN_01008	CAEBREN_19051	G0P824	G0N617	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.436
CAEBREN_01008	CAEBREN_20979	G0P824	G0PGS8	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.563
CAEBREN_01008	CAEBREN_25573	G0P824	G0PKS5	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.563
CAEBREN_01008	CAEBREN_25656	G0P824	G0NTX9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.692
CAEBREN_01008	CAEBREN_26093	G0P824	G0N700	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.464
CAEBREN_01008	Cbn-cdc-48.1	G0P824	G0MVN9	AAA domain-containing protein; Belongs to the AAA ATPase family.	CBN-CDC-48.1 protein; Belongs to the AAA ATPase family.	0.544
CAEBREN_01008	Cbn-cdc-48.2	G0P824	G0PJC1	AAA domain-containing protein; Belongs to the AAA ATPase family.	CBN-CDC-48.2 protein; Belongs to the AAA ATPase family.	0.545
CAEBREN_01008	Cbn-mac-1	G0P824	G0MZ81	AAA domain-containing protein; Belongs to the AAA ATPase family.	CBN-MAC-1 protein.	0.554
CAEBREN_01008	Cbn-rpt-1	G0P824	G0PL53	AAA domain-containing protein; Belongs to the AAA ATPase family.	CBN-RPT-1 protein; Belongs to the AAA ATPase family.	0.428

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