(25 nodes) Ion transport protein network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbn-ocr-3	CBN-OCR-3 protein; Belongs to the transient receptor (TC 1.A.4) family. (743 aa)
	CAEBREN_28992	Uncharacterized protein. (812 aa)
	CAEBREN_02576	Cyclic nucleotide-binding domain-containing protein. (794 aa)
	CAEBREN_17383	Cyclic nucleotide-binding domain-containing protein. (649 aa)
	Cbn-unc-68	CBN-UNC-68 protein. (5370 aa)
	Cbn-cca-1	CBN-CCA-1 protein. (2038 aa)
	CAEBREN_18021	Ion_trans domain-containing protein. (685 aa)
	Cbn-tax-4	CBN-TAX-4 protein. (751 aa)
	CAEBREN_21572	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (1974 aa)
	CAEBREN_04088	Cyclic nucleotide-binding domain-containing protein. (770 aa)
	CAEBREN_31497	ANK_REP_REGION domain-containing protein. (743 aa)
	CAEBREN_30230	Uncharacterized protein. (2865 aa)
	CAEBREN_12339	Uncharacterized protein. (909 aa)
	CAEBREN_31692	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (1382 aa)
	CAEBREN_01769	Uncharacterized protein. (1878 aa)
	CAEBREN_30511	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (974 aa)
	CAEBREN_29382	Uncharacterized protein. (2869 aa)
	CAEBREN_03333	Uncharacterized protein. (1990 aa)
	Cbn-nca-1	CBN-NCA-1 protein. (605 aa)
	CAEBREN_15430	Uncharacterized protein. (1227 aa)
	CAEBREN_26274	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (853 aa)
	CAEBREN_29859	Ion_trans domain-containing protein; Belongs to the potassium channel family. (146 aa)
	CAEBREN_08298	Uncharacterized protein; Belongs to the potassium channel family. (1345 aa)
	Cbn-nca-2	CBN-NCA-2 protein. (1785 aa)
	CAEBREN_29219	EF-hand domain-containing protein. (1344 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_01769	Cbn-cca-1	G0NW26	G0MWE8	Uncharacterized protein.	CBN-CCA-1 protein.	0.891
CAEBREN_01769	Cbn-unc-68	G0NW26	G0MY32	Uncharacterized protein.	CBN-UNC-68 protein.	0.597
CAEBREN_02576	CAEBREN_04088	G0MZY9	G0PHM5	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.624
CAEBREN_02576	CAEBREN_12339	G0MZY9	G0P3K6	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.534
CAEBREN_02576	CAEBREN_17383	G0MZY9	G0MZY1	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.554
CAEBREN_02576	Cbn-ocr-3	G0MZY9	G0MAZ6	Cyclic nucleotide-binding domain-containing protein.	CBN-OCR-3 protein; Belongs to the transient receptor (TC 1.A.4) family.	0.469
CAEBREN_02576	Cbn-tax-4	G0MZY9	G0MJW8	Cyclic nucleotide-binding domain-containing protein.	CBN-TAX-4 protein.	0.652
CAEBREN_03333	CAEBREN_18021	G0NK65	G0MKR7	Uncharacterized protein.	Ion_trans domain-containing protein.	0.554
CAEBREN_03333	CAEBREN_21572	G0NK65	G0MJ18	Uncharacterized protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.646
CAEBREN_03333	CAEBREN_26274	G0NK65	G0N8S8	Uncharacterized protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.740
CAEBREN_03333	CAEBREN_29382	G0NK65	G0NRS2	Uncharacterized protein.	Uncharacterized protein.	0.633
CAEBREN_03333	CAEBREN_30230	G0NK65	G0P6X0	Uncharacterized protein.	Uncharacterized protein.	0.633
CAEBREN_03333	CAEBREN_30511	G0NK65	G0NU29	Uncharacterized protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.654
CAEBREN_03333	CAEBREN_31497	G0NK65	G0PG53	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.654
CAEBREN_03333	CAEBREN_31692	G0NK65	G0P206	Uncharacterized protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.646
CAEBREN_03333	Cbn-ocr-3	G0NK65	G0MAZ6	Uncharacterized protein.	CBN-OCR-3 protein; Belongs to the transient receptor (TC 1.A.4) family.	0.582
CAEBREN_04088	CAEBREN_02576	G0PHM5	G0MZY9	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.624
CAEBREN_04088	CAEBREN_12339	G0PHM5	G0P3K6	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.513
CAEBREN_04088	CAEBREN_17383	G0PHM5	G0MZY1	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.636
CAEBREN_04088	Cbn-tax-4	G0PHM5	G0MJW8	Cyclic nucleotide-binding domain-containing protein.	CBN-TAX-4 protein.	0.768

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