STRINGSTRING
Cbn-aagr-4 Cbn-aagr-4 CAEBREN_12391 CAEBREN_12391 CAEBREN_31927 CAEBREN_31927 Cbn-aagr-3 Cbn-aagr-3 CAEBREN_05947 CAEBREN_05947 CAEBREN_25327 CAEBREN_25327 CAEBREN_30996 CAEBREN_30996
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-aagr-4CBN-AAGR-4 protein; Belongs to the glycosyl hydrolase 31 family. (903 aa)
CAEBREN_12391P-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (753 aa)
CAEBREN_31927P-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (972 aa)
Cbn-aagr-3CBN-AAGR-3 protein; Belongs to the glycosyl hydrolase 31 family. (924 aa)
CAEBREN_05947Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (173 aa)
CAEBREN_25327P-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (929 aa)
CAEBREN_30996Gal_mutarotas_2 domain-containing protein. (347 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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