Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAEBREN_00568 | CAEBREN_08825 | G0NTG3 | G0N5Y6 | DNA_binding_1 domain-containing protein. | Uncharacterized protein. | 0.476 |
| CAEBREN_00568 | CAEBREN_20919 | G0NTG3 | G0NII4 | DNA_binding_1 domain-containing protein. | Uncharacterized protein. | 0.891 |
| CAEBREN_00568 | CAEBREN_22663 | G0NTG3 | G0MQF0 | DNA_binding_1 domain-containing protein. | CBFD_NFYB_HMF domain-containing protein. | 0.451 |
| CAEBREN_00568 | CAEBREN_29358 | G0NTG3 | G0PJ28 | DNA_binding_1 domain-containing protein. | Uncharacterized protein. | 0.562 |
| CAEBREN_00568 | CAEBREN_30297 | G0NTG3 | G0PA93 | DNA_binding_1 domain-containing protein. | AP_endonuc_2 domain-containing protein. | 0.550 |
| CAEBREN_00568 | CAEBREN_30807 | G0NTG3 | G0PJ29 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase. | 0.562 |
| CAEBREN_00568 | CAEBREN_31526 | G0NTG3 | G0PLN5 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase. | 0.563 |
| CAEBREN_00568 | CAEBREN_31931 | G0NTG3 | G0P0X2 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase. | 0.562 |
| CAEBREN_00568 | Cbn-exo-3 | G0NTG3 | G0NVQ7 | DNA_binding_1 domain-containing protein. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.476 |
| CAEBREN_00568 | Cbn-nth-1 | G0NTG3 | G0MGC3 | DNA_binding_1 domain-containing protein. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.651 |
| CAEBREN_00568 | Cbn-pme-1 | G0NTG3 | G0NM99 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase. | 0.485 |
| CAEBREN_00568 | Cbn-pme-2 | G0NTG3 | G0MN11 | DNA_binding_1 domain-containing protein. | Poly [ADP-ribose] polymerase. | 0.563 |
| CAEBREN_00568 | Cbn-ung-1 | G0NTG3 | G0NRK2 | DNA_binding_1 domain-containing protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.640 |
| CAEBREN_00568 | crn-1 | G0NTG3 | G0PD85 | DNA_binding_1 domain-containing protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.513 |
| CAEBREN_01380 | CAEBREN_04215 | G0N8B5 | G0MP34 | DNA ligase. | Uncharacterized protein. | 0.546 |
| CAEBREN_01380 | CAEBREN_08130 | G0N8B5 | G0NU65 | DNA ligase. | Uncharacterized protein. | 0.840 |
| CAEBREN_01380 | CAEBREN_08695 | G0N8B5 | G0P9W5 | DNA ligase. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.988 |
| CAEBREN_01380 | CAEBREN_08825 | G0N8B5 | G0N5Y6 | DNA ligase. | Uncharacterized protein. | 0.839 |
| CAEBREN_01380 | CAEBREN_11089 | G0N8B5 | G0MLU7 | DNA ligase. | CBFD_NFYB_HMF domain-containing protein. | 0.698 |
| CAEBREN_01380 | CAEBREN_12656 | G0N8B5 | G0N9Q7 | DNA ligase. | PARP-type domain-containing protein. | 0.708 |
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