STRINGSTRING
CAEBREN_18241 CAEBREN_18241 CAEBREN_20494 CAEBREN_20494 CAEBREN_29612 CAEBREN_29612 CAEBREN_17155 CAEBREN_17155 CAEBREN_32385 CAEBREN_32385 CAEBREN_31033 CAEBREN_31033 Cbn-mlh-1 Cbn-mlh-1 CAEBREN_09732 CAEBREN_09732 CAEBREN_00729 CAEBREN_00729 Cbn-rpa-1 Cbn-rpa-1 CAEBREN_01380 CAEBREN_01380 CAEBREN_25255 CAEBREN_25255 CAEBREN_16564 CAEBREN_16564 CAEBREN_14752 CAEBREN_14752 CAEBREN_21758 CAEBREN_21758 CAEBREN_31074 CAEBREN_31074 CAEBREN_08695 CAEBREN_08695 CAEBREN_32455 CAEBREN_32455 Cbn-pms-2 Cbn-pms-2 CAEBREN_10667 CAEBREN_10667 CAEBREN_23316 CAEBREN_23316 CAEBREN_22178 CAEBREN_22178 CAEBREN_26380 CAEBREN_26380 CAEBREN_28386 CAEBREN_28386 Cbn-msh-5 Cbn-msh-5 CAEBREN_18968 CAEBREN_18968 CAEBREN_30301 CAEBREN_30301 Cbn-rfc-1 Cbn-rfc-1 CAEBREN_00497 CAEBREN_00497 CAEBREN_32715 CAEBREN_32715 CAEBREN_08130 CAEBREN_08130 Cbn-msh-6 Cbn-msh-6 CAEBREN_09516 CAEBREN_09516 Cbn-rfc-3 Cbn-rfc-3 CAEBREN_15936 CAEBREN_15936 CAEBREN_32394 CAEBREN_32394 CAEBREN_29528 CAEBREN_29528 CAEBREN_31022 CAEBREN_31022 CAEBREN_24533 CAEBREN_24533 Cbn-mdt-30 Cbn-mdt-30 CAEBREN_08790 CAEBREN_08790 CAEBREN_24174 CAEBREN_24174 CAEBREN_06911 CAEBREN_06911 Cbn-pcn-1 Cbn-pcn-1 CAEBREN_04215 CAEBREN_04215 Cbn-mtss-1 Cbn-mtss-1 CAEBREN_21080 CAEBREN_21080 CAEBREN_14732 CAEBREN_14732 CAEBREN_15560 CAEBREN_15560 CAEBREN_02863 CAEBREN_02863
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_18241AAA domain-containing protein. (326 aa)
CAEBREN_20494Uncharacterized protein. (302 aa)
CAEBREN_29612DNA_MISMATCH_REPAIR_2 domain-containing protein. (867 aa)
CAEBREN_17155Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (1297 aa)
CAEBREN_32385DNA polymerase. (1042 aa)
CAEBREN_31033zf-C4pol domain-containing protein. (73 aa)
Cbn-mlh-1CBN-MLH-1 protein. (761 aa)
CAEBREN_09732Uncharacterized protein. (167 aa)
CAEBREN_00729DNA_MISMATCH_REPAIR_2 domain-containing protein. (844 aa)
Cbn-rpa-1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (658 aa)
CAEBREN_01380DNA ligase. (777 aa)
CAEBREN_25255DNA ligase. (777 aa)
CAEBREN_16564Uncharacterized protein. (252 aa)
CAEBREN_14752Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (658 aa)
CAEBREN_21758Uncharacterized protein. (262 aa)
CAEBREN_31074AAA domain-containing protein. (511 aa)
CAEBREN_08695Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
CAEBREN_32455DNA polymerase. (1017 aa)
Cbn-pms-2CBN-PMS-2 protein. (807 aa)
CAEBREN_10667MutL_C domain-containing protein. (247 aa)
CAEBREN_23316SAP domain-containing protein. (427 aa)
CAEBREN_22178Uncharacterized protein. (354 aa)
CAEBREN_26380Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
CAEBREN_28386zf-C4pol domain-containing protein. (71 aa)
Cbn-msh-5CBN-MSH-5 protein. (241 aa)
CAEBREN_18968Uncharacterized protein. (124 aa)
CAEBREN_30301Exonuclease domain-containing protein. (272 aa)
Cbn-rfc-1Replication factor C subunit 1. (842 aa)
CAEBREN_00497DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1144 aa)
CAEBREN_32715Uncharacterized protein. (427 aa)
CAEBREN_08130Uncharacterized protein. (452 aa)
Cbn-msh-6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1193 aa)
CAEBREN_09516AAA domain-containing protein. (1209 aa)
Cbn-rfc-3CBN-RFC-3 protein. (354 aa)
CAEBREN_15936SAP domain-containing protein. (174 aa)
CAEBREN_32394Uncharacterized protein. (270 aa)
CAEBREN_29528Uncharacterized protein. (210 aa)
CAEBREN_31022Uncharacterized protein. (372 aa)
CAEBREN_24533Uncharacterized protein. (325 aa)
Cbn-mdt-30CBN-MDT-30 protein. (529 aa)
CAEBREN_08790AAA domain-containing protein. (349 aa)
CAEBREN_24174AAA domain-containing protein. (1194 aa)
CAEBREN_06911Uncharacterized protein. (409 aa)
Cbn-pcn-1Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (229 aa)
CAEBREN_04215Uncharacterized protein. (354 aa)
Cbn-mtss-1CBN-MTSS-1 protein. (169 aa)
CAEBREN_21080Uncharacterized protein. (199 aa)
CAEBREN_14732AAA domain-containing protein. (353 aa)
CAEBREN_15560Exonuclease domain-containing protein. (300 aa)
CAEBREN_02863Uncharacterized protein. (663 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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