STRINGSTRING
AHG39311.1 AHG39311.1 AHG39313.1 AHG39313.1 AHG39314.1 AHG39314.1 AHG43550.1 AHG43550.1 AHG40665.1 AHG40665.1 AHG40666.1 AHG40666.1 AHG41476.1 AHG41476.1 AHG41477.1 AHG41477.1 AHG41478.1 AHG41478.1 AHG41479.1 AHG41479.1 AHG41480.1 AHG41480.1 AHG41481.1 AHG41481.1 AHG43399.1 AHG43399.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHG39311.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
AHG39313.1Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
AHG39314.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
AHG43550.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (58 aa)
AHG40665.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
AHG40666.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
AHG41476.1Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
AHG41477.13-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AHG41478.1Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (493 aa)
AHG41479.1Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
AHG41480.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AHG41481.1NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (187 aa)
AHG43399.1Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
Your Current Organism:
Pseudomonas syringae CC1557
NCBI taxonomy Id: 1357279
Other names: P. syringae CC1557
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