(5 nodes) Mixed, incl. Glyoxalase-like domain, group 6, and Acyl-CoA thioester hydrolase YbgC/YbaW family network (Sphingopyxis sp. QXT31)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQA00528.1	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
	AQA00529.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
	AQA00531.1	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
	AQA00532.1	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	AQA00533.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)

Your Current Organism:

Sphingopyxis sp. QXT31

NCBI taxonomy Id: 1357916
Other names: S. sp. QXT-31, Sphingopyxis sp. QXT-31

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQA00528.1	AQA00529.1	BWQ93_20240	BWQ93_20245	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
AQA00528.1	AQA00531.1	BWQ93_20240	BWQ93_20255	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
AQA00528.1	AQA00532.1	BWQ93_20240	BWQ93_20260	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
AQA00528.1	AQA00533.1	BWQ93_20240	BWQ93_20265	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
AQA00529.1	AQA00528.1	BWQ93_20245	BWQ93_20240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
AQA00529.1	AQA00531.1	BWQ93_20245	BWQ93_20255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AQA00529.1	AQA00532.1	BWQ93_20245	BWQ93_20260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AQA00529.1	AQA00533.1	BWQ93_20245	BWQ93_20265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
AQA00531.1	AQA00528.1	BWQ93_20255	BWQ93_20240	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
AQA00531.1	AQA00529.1	BWQ93_20255	BWQ93_20245	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AQA00531.1	AQA00532.1	BWQ93_20255	BWQ93_20260	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AQA00531.1	AQA00533.1	BWQ93_20255	BWQ93_20265	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AQA00532.1	AQA00528.1	BWQ93_20260	BWQ93_20240	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
AQA00532.1	AQA00529.1	BWQ93_20260	BWQ93_20245	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AQA00532.1	AQA00531.1	BWQ93_20260	BWQ93_20255	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AQA00532.1	AQA00533.1	BWQ93_20260	BWQ93_20265	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AQA00533.1	AQA00528.1	BWQ93_20265	BWQ93_20240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
AQA00533.1	AQA00529.1	BWQ93_20265	BWQ93_20245	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
AQA00533.1	AQA00531.1	BWQ93_20265	BWQ93_20255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AQA00533.1	AQA00532.1	BWQ93_20265	BWQ93_20260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804