22 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_07524	Sequestosome-1. (491 aa)
	L798_05836	E3 ubiquitin-protein ligase RNF168. (653 aa)
	L798_14974	Ubiquilin-1. (570 aa)
	L798_05772	26S proteasome non-ATPase regulatory subunit 4. (395 aa)
	L798_07579	Zinc finger RAD18 domain-containing protein. (636 aa)
	L798_06542	UBX domain-containing protein 1. (344 aa)
	L798_08781	MINDY_DUB domain-containing protein. (489 aa)
	L798_07551	Ubiquitin fusion degradation protein 1-like protein. (301 aa)
	L798_10461	E3 ubiquitin-protein ligase RAD18. (651 aa)
	L798_07198	Ubiquitin-like protein 7. (377 aa)
	L798_07359	Uncharacterized protein. (879 aa)
	L798_06610	Large proline-rich protein BAT3. (1260 aa)
	L798_07494	RING finger protein 31. (2226 aa)
	L798_12879	Optineurin. (704 aa)
	L798_09910	Nuclear protein localization protein 4-like protein. (656 aa)
	L798_10598	UV excision repair protein RAD23-like protein B. (366 aa)
	L798_15706	Ubiquitin thioesterase trabid. (752 aa)
	L798_01113	Ubiquitin carrier protein E2 28. (415 aa)
	L798_04179	BRCA1-A complex subunit BRE. (388 aa)
	L798_13465	Vacuolar protein sorting-associated protein 13D. (4142 aa)
	L798_13425	BRCA1-A complex subunit Abraxas. (469 aa)
	L798_15736	OTU domain-containing protein 7B. (299 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_01113	L798_05772	A0A067QWY6	A0A067RJY8	Ubiquitin carrier protein E2 28.	26S proteasome non-ATPase regulatory subunit 4.	0.439
L798_01113	L798_07494	A0A067QWY6	A0A067R5D9	Ubiquitin carrier protein E2 28.	RING finger protein 31.	0.512
L798_01113	L798_09910	A0A067QWY6	A0A067R112	Ubiquitin carrier protein E2 28.	Nuclear protein localization protein 4-like protein.	0.510
L798_01113	L798_10461	A0A067QWY6	A0A067R7N3	Ubiquitin carrier protein E2 28.	E3 ubiquitin-protein ligase RAD18.	0.591
L798_01113	L798_10598	A0A067QWY6	A0A067R0X4	Ubiquitin carrier protein E2 28.	UV excision repair protein RAD23-like protein B.	0.457
L798_04179	L798_05836	A0A067QST8	A0A067RFK1	BRCA1-A complex subunit BRE.	E3 ubiquitin-protein ligase RNF168.	0.465
L798_04179	L798_13425	A0A067QST8	A0A067QPN2	BRCA1-A complex subunit BRE.	BRCA1-A complex subunit Abraxas.	0.984
L798_05772	L798_01113	A0A067RJY8	A0A067QWY6	26S proteasome non-ATPase regulatory subunit 4.	Ubiquitin carrier protein E2 28.	0.439
L798_05772	L798_07198	A0A067RJY8	A0A067R792	26S proteasome non-ATPase regulatory subunit 4.	Ubiquitin-like protein 7.	0.937
L798_05772	L798_07551	A0A067RJY8	A0A067R875	26S proteasome non-ATPase regulatory subunit 4.	Ubiquitin fusion degradation protein 1-like protein.	0.886
L798_05772	L798_09910	A0A067RJY8	A0A067R112	26S proteasome non-ATPase regulatory subunit 4.	Nuclear protein localization protein 4-like protein.	0.619
L798_05772	L798_10598	A0A067RJY8	A0A067R0X4	26S proteasome non-ATPase regulatory subunit 4.	UV excision repair protein RAD23-like protein B.	0.989
L798_05772	L798_14974	A0A067RJY8	A0A067RI93	26S proteasome non-ATPase regulatory subunit 4.	Ubiquilin-1.	0.985
L798_05836	L798_04179	A0A067RFK1	A0A067QST8	E3 ubiquitin-protein ligase RNF168.	BRCA1-A complex subunit BRE.	0.465
L798_06542	L798_06610	A0A067R9Y2	A0A067R5R9	UBX domain-containing protein 1.	Large proline-rich protein BAT3.	0.929
L798_06542	L798_07198	A0A067R9Y2	A0A067R792	UBX domain-containing protein 1.	Ubiquitin-like protein 7.	0.488
L798_06542	L798_07551	A0A067R9Y2	A0A067R875	UBX domain-containing protein 1.	Ubiquitin fusion degradation protein 1-like protein.	0.525
L798_06542	L798_10598	A0A067R9Y2	A0A067R0X4	UBX domain-containing protein 1.	UV excision repair protein RAD23-like protein B.	0.739
L798_06542	L798_14974	A0A067R9Y2	A0A067RI93	UBX domain-containing protein 1.	Ubiquilin-1.	0.462
L798_06610	L798_06542	A0A067R5R9	A0A067R9Y2	Large proline-rich protein BAT3.	UBX domain-containing protein 1.	0.929