STRINGSTRING
L798_12771 L798_12771 L798_11519 L798_11519 L798_10502 L798_10502 L798_14693 L798_14693 L798_12911 L798_12911 L798_13795 L798_13795 L798_07227 L798_07227 L798_12748 L798_12748 L798_00453 L798_00453 L798_15427 L798_15427 L798_01820 L798_01820 L798_07131 L798_07131
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L798_12771Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (641 aa)
L798_11519Division abnormally delayed protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (891 aa)
L798_10502Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (455 aa)
L798_14693U3 small nucleolar RNA-associated protein 18-like protein. (526 aa)
L798_12911Charged multivesicular body protein 4b. (225 aa)
L798_13795Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (155 aa)
L798_07227Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
L798_12748Serine/threonine-protein kinase 12; Belongs to the protein kinase superfamily. (356 aa)
L798_00453Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (384 aa)
L798_15427Putative RISC-loading complex subunit. (334 aa)
L798_01820Protein abnormal spindle. (2205 aa)
L798_07131Programmed cell death 6-interacting protein. (838 aa)
Your Current Organism:
Zootermopsis nevadensis
NCBI taxonomy Id: 136037
Other names: Z. nevadensis
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