28 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_15602	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2. (459 aa)
	L798_15397	Nuclear factor NF-kappa-B p105 subunit. (275 aa)
	L798_14840	tRNA (Cytosine-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (375 aa)
	L798_14702	Death domain-containing adapter protein BG4. (230 aa)
	L798_15164	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (805 aa)
	L798_13627	Histone-lysine N-methyltransferase, H3 lysine-9 specific 5. (1345 aa)
	L798_13828	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (676 aa)
	L798_00401	Autophagy protein 5; Involved in autophagic vesicle formation. (264 aa)
	L798_13572	Uncharacterized protein. (506 aa)
	L798_08465	Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (720 aa)
	L798_08467	Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (422 aa)
	L798_08472	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (375 aa)
	L798_09548	Putative ATP-dependent RNA helicase me31b. (365 aa)
	L798_03727	Protein toll. (1416 aa)
	L798_08464	ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (560 aa)
	L798_09913	WD repeat domain phosphoinositide-interacting protein 2. (474 aa)
	L798_02540	E3 ubiquitin-protein ligase. (853 aa)
	L798_03051	Receptor-interacting serine/threonine-protein kinase 1. (244 aa)
	L798_08473	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (683 aa)
	L798_01309	TNF receptor-associated factor 6. (383 aa)
	L798_14773	Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (Cyclizing). (588 aa)
	L798_00294	Cell division protein kinase 9. (286 aa)
	L798_00295	Cell division protein kinase 9; Belongs to the protein kinase superfamily. (401 aa)
	L798_05299	Nuclear pore complex protein Nup98-Nup96. (1868 aa)
	L798_08965	Uncharacterized protein. (901 aa)
	L798_09211	Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (781 aa)
	L798_03320	E3 ubiquitin-protein ligase. (1374 aa)
	L798_02022	Autophagy-related protein 7. (199 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_00401	L798_02022	A0A067QVF6	A0A067RRH5	Autophagy protein 5; Involved in autophagic vesicle formation.	Autophagy-related protein 7.	0.759
L798_00401	L798_09913	A0A067QVF6	A0A067RCU6	Autophagy protein 5; Involved in autophagic vesicle formation.	WD repeat domain phosphoinositide-interacting protein 2.	0.953
L798_00401	L798_13572	A0A067QVF6	A0A067R010	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.759
L798_01309	L798_03727	A0A067RFW6	A0A067RBC6	TNF receptor-associated factor 6.	Protein toll.	0.543
L798_01309	L798_15164	A0A067RFW6	A0A067QNY8	TNF receptor-associated factor 6.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.885
L798_01309	L798_15602	A0A067RFW6	A0A067QYZ6	TNF receptor-associated factor 6.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	0.996
L798_02022	L798_00401	A0A067RRH5	A0A067QVF6	Autophagy-related protein 7.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.759
L798_02022	L798_09913	A0A067RRH5	A0A067RCU6	Autophagy-related protein 7.	WD repeat domain phosphoinositide-interacting protein 2.	0.779
L798_02022	L798_13572	A0A067RRH5	A0A067R010	Autophagy-related protein 7.	Uncharacterized protein.	0.947
L798_03051	L798_14702	A0A067RE37	A0A067QNS8	Receptor-interacting serine/threonine-protein kinase 1.	Death domain-containing adapter protein BG4.	0.984
L798_03051	L798_15164	A0A067RE37	A0A067QNY8	Receptor-interacting serine/threonine-protein kinase 1.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.490
L798_03051	L798_15397	A0A067RE37	A0A067QLW1	Receptor-interacting serine/threonine-protein kinase 1.	Nuclear factor NF-kappa-B p105 subunit.	0.707
L798_03051	L798_15602	A0A067RE37	A0A067QYZ6	Receptor-interacting serine/threonine-protein kinase 1.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	0.478
L798_03727	L798_01309	A0A067RBC6	A0A067RFW6	Protein toll.	TNF receptor-associated factor 6.	0.543
L798_03727	L798_15602	A0A067RBC6	A0A067QYZ6	Protein toll.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	0.400
L798_08464	L798_08472	A0A067RCE2	A0A067R5K3	ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.901
L798_08464	L798_13828	A0A067RCE2	A0A067QTL2	ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.901
L798_08472	L798_08464	A0A067R5K3	A0A067RCE2	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family.	0.901
L798_08472	L798_13828	A0A067R5K3	A0A067QTL2	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.901
L798_09913	L798_00401	A0A067RCU6	A0A067QVF6	WD repeat domain phosphoinositide-interacting protein 2.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.953