27 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_12886	Structural maintenance of chromosomes protein 6. (1089 aa)
	L798_00654	TRAF-interacting protein. (441 aa)
	L798_02126	E3 ubiquitin-protein ligase RNF8. (254 aa)
	L798_10113	Double-strand break repair protein MRE11A. (76 aa)
	L798_12289	Gastrulation defective protein 1-like protein. (705 aa)
	L798_13157	DNA polymerase eta. (803 aa)
	L798_09879	Poly(ADP-ribose) glycohydrolase ARH3. (348 aa)
	L798_09707	Histone H2A; Belongs to the histone H2A family. (128 aa)
	L798_10461	E3 ubiquitin-protein ligase RAD18. (651 aa)
	L798_14507	Structural maintenance of chromosomes protein 6. (178 aa)
	L798_11781	Tumor suppressor p53-binding protein 1. (1553 aa)
	L798_14834	DNA excision repair protein ERCC-6. (1497 aa)
	L798_11120	Uncharacterized protein. (128 aa)
	L798_09593	Replication protein A 14 kDa subunit. (116 aa)
	L798_04486	Uncharacterized protein. (761 aa)
	L798_05836	E3 ubiquitin-protein ligase RNF168. (653 aa)
	L798_12820	Aprataxin and PNK-like factor. (402 aa)
	L798_06593	Checkpoint protein; Belongs to the HUS1 family. (279 aa)
	L798_07020	Double-strand break repair protein MRE11. (153 aa)
	L798_07584	E3 ubiquitin-protein ligase RNF8 A. (542 aa)
	L798_14777	Cullin-5; Belongs to the cullin family. (789 aa)
	L798_02501	E3 ubiquitin-protein ligase RNF8. (97 aa)
	L798_09202	Uncharacterized protein. (627 aa)
	L798_15290	DNA damage-binding protein 1. (1145 aa)
	L798_13015	Structural maintenance of chromosomes protein 6. (127 aa)
	L798_00225	RING finger and WD repeat domain-containing protein 3. (579 aa)
	L798_12561	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (714 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_00225	L798_05836	A0A067QW56	A0A067RFK1	RING finger and WD repeat domain-containing protein 3.	E3 ubiquitin-protein ligase RNF168.	0.467
L798_00225	L798_09593	A0A067QW56	A0A067R9A9	RING finger and WD repeat domain-containing protein 3.	Replication protein A 14 kDa subunit.	0.945
L798_02126	L798_05836	A0A067QHX9	A0A067RFK1	E3 ubiquitin-protein ligase RNF8.	E3 ubiquitin-protein ligase RNF168.	0.488
L798_02126	L798_11781	A0A067QHX9	A0A067QXL7	E3 ubiquitin-protein ligase RNF8.	Tumor suppressor p53-binding protein 1.	0.601
L798_02501	L798_05836	A0A067RRL7	A0A067RFK1	E3 ubiquitin-protein ligase RNF8.	E3 ubiquitin-protein ligase RNF168.	0.488
L798_02501	L798_11781	A0A067RRL7	A0A067QXL7	E3 ubiquitin-protein ligase RNF8.	Tumor suppressor p53-binding protein 1.	0.601
L798_04486	L798_06593	A0A067RD52	A0A067RHI8	Uncharacterized protein.	Checkpoint protein; Belongs to the HUS1 family.	0.591
L798_04486	L798_07020	A0A067RD52	A0A067RHP0	Uncharacterized protein.	Double-strand break repair protein MRE11.	0.983
L798_04486	L798_09593	A0A067RD52	A0A067R9A9	Uncharacterized protein.	Replication protein A 14 kDa subunit.	0.521
L798_04486	L798_10113	A0A067RD52	A0A067QEN6	Uncharacterized protein.	Double-strand break repair protein MRE11A.	0.837
L798_04486	L798_11120	A0A067RD52	A0A067QX37	Uncharacterized protein.	Uncharacterized protein.	0.516
L798_04486	L798_11781	A0A067RD52	A0A067QXL7	Uncharacterized protein.	Tumor suppressor p53-binding protein 1.	0.589
L798_04486	L798_12561	A0A067RD52	A0A067QUA1	Uncharacterized protein.	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	0.516
L798_05836	L798_00225	A0A067RFK1	A0A067QW56	E3 ubiquitin-protein ligase RNF168.	RING finger and WD repeat domain-containing protein 3.	0.467
L798_05836	L798_02126	A0A067RFK1	A0A067QHX9	E3 ubiquitin-protein ligase RNF168.	E3 ubiquitin-protein ligase RNF8.	0.488
L798_05836	L798_02501	A0A067RFK1	A0A067RRL7	E3 ubiquitin-protein ligase RNF168.	E3 ubiquitin-protein ligase RNF8.	0.488
L798_05836	L798_07020	A0A067RFK1	A0A067RHP0	E3 ubiquitin-protein ligase RNF168.	Double-strand break repair protein MRE11.	0.456
L798_05836	L798_07584	A0A067RFK1	A0A067RME7	E3 ubiquitin-protein ligase RNF168.	E3 ubiquitin-protein ligase RNF8 A.	0.488
L798_05836	L798_10113	A0A067RFK1	A0A067QEN6	E3 ubiquitin-protein ligase RNF168.	Double-strand break repair protein MRE11A.	0.456
L798_05836	L798_11120	A0A067RFK1	A0A067QX37	E3 ubiquitin-protein ligase RNF168.	Uncharacterized protein.	0.439