9 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_08803	Ubiquitin. (156 aa)
	L798_11683	Ubiquitin. (128 aa)
	L798_14995	Ubiquitin. (230 aa)
	L798_12584	Ubiquitin. (153 aa)
	L798_01850	Ubiquitin. (229 aa)
	L798_12179	Ubiquitin. (77 aa)
	L798_02705	NEDD8. (97 aa)
	L798_11253	Ubiquitin domain-containing protein UBFD1. (268 aa)
	L798_06610	Large proline-rich protein BAT3. (1260 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_01850	L798_02705	A0A067QVQ6	A0A067RD15	Ubiquitin.	NEDD8.	0.722
L798_01850	L798_06610	A0A067QVQ6	A0A067R5R9	Ubiquitin.	Large proline-rich protein BAT3.	0.466
L798_01850	L798_08803	A0A067QVQ6	A0A067R2I5	Ubiquitin.	Ubiquitin.	0.912
L798_01850	L798_11253	A0A067QVQ6	A0A067R6G5	Ubiquitin.	Ubiquitin domain-containing protein UBFD1.	0.630
L798_01850	L798_11683	A0A067QVQ6	A0A067QXB3	Ubiquitin.	Ubiquitin.	0.937
L798_01850	L798_12179	A0A067QVQ6	A0A067RUW4	Ubiquitin.	Ubiquitin.	0.828
L798_01850	L798_12584	A0A067QVQ6	A0A067QUA6	Ubiquitin.	Ubiquitin.	0.611
L798_02705	L798_01850	A0A067RD15	A0A067QVQ6	NEDD8.	Ubiquitin.	0.722
L798_02705	L798_08803	A0A067RD15	A0A067R2I5	NEDD8.	Ubiquitin.	0.932
L798_02705	L798_11253	A0A067RD15	A0A067R6G5	NEDD8.	Ubiquitin domain-containing protein UBFD1.	0.590
L798_02705	L798_11683	A0A067RD15	A0A067QXB3	NEDD8.	Ubiquitin.	0.940
L798_02705	L798_12179	A0A067RD15	A0A067RUW4	NEDD8.	Ubiquitin.	0.836
L798_02705	L798_12584	A0A067RD15	A0A067QUA6	NEDD8.	Ubiquitin.	0.498
L798_02705	L798_14995	A0A067RD15	A0A067QWD5	NEDD8.	Ubiquitin.	0.723
L798_06610	L798_01850	A0A067R5R9	A0A067QVQ6	Large proline-rich protein BAT3.	Ubiquitin.	0.466
L798_06610	L798_12584	A0A067R5R9	A0A067QUA6	Large proline-rich protein BAT3.	Ubiquitin.	0.466
L798_06610	L798_14995	A0A067R5R9	A0A067QWD5	Large proline-rich protein BAT3.	Ubiquitin.	0.466
L798_08803	L798_01850	A0A067R2I5	A0A067QVQ6	Ubiquitin.	Ubiquitin.	0.912
L798_08803	L798_02705	A0A067R2I5	A0A067RD15	Ubiquitin.	NEDD8.	0.932
L798_08803	L798_11253	A0A067R2I5	A0A067R6G5	Ubiquitin.	Ubiquitin domain-containing protein UBFD1.	0.737