6 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_01510	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1. (504 aa)
	L798_14845	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (313 aa)
	L798_15069	TMEM189_B_dmain domain-containing protein. (303 aa)
	L798_15602	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2. (459 aa)
	L798_12179	Ubiquitin. (77 aa)
	L798_04326	Mitogen-activated protein kinase. (337 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_01510	L798_04326	A0A067QIQ1	A0A067RWU2	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1.	Mitogen-activated protein kinase.	0.907
L798_01510	L798_14845	A0A067QIQ1	A0A067QN57	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.491
L798_01510	L798_15602	A0A067QIQ1	A0A067QYZ6	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	0.913
L798_04326	L798_01510	A0A067RWU2	A0A067QIQ1	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1.	0.907
L798_04326	L798_14845	A0A067RWU2	A0A067QN57	Mitogen-activated protein kinase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.998
L798_12179	L798_15069	A0A067RUW4	A0A067QNV2	Ubiquitin.	TMEM189_B_dmain domain-containing protein.	0.678
L798_12179	L798_15602	A0A067RUW4	A0A067QYZ6	Ubiquitin.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	0.681
L798_14845	L798_01510	A0A067QN57	A0A067QIQ1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1.	0.491
L798_14845	L798_04326	A0A067QN57	A0A067RWU2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.998
L798_14845	L798_15602	A0A067QN57	A0A067QYZ6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	0.466
L798_15069	L798_12179	A0A067QNV2	A0A067RUW4	TMEM189_B_dmain domain-containing protein.	Ubiquitin.	0.678
L798_15602	L798_01510	A0A067QYZ6	A0A067QIQ1	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	Mitogen-activated protein kinase kinase kinase 7-interacting protein 1.	0.913
L798_15602	L798_12179	A0A067QYZ6	A0A067RUW4	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	Ubiquitin.	0.681
L798_15602	L798_14845	A0A067QYZ6	A0A067QN57	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.466