7 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_14995	Ubiquitin. (230 aa)
	L798_13431	Protein neuralized. (456 aa)
	L798_01638	E3 ubiquitin-protein ligase. (859 aa)
	L798_01850	Ubiquitin. (229 aa)
	L798_11683	Ubiquitin. (128 aa)
	L798_10978	E3 ubiquitin-protein ligase MIB1. (400 aa)
	L798_08803	Ubiquitin. (156 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_01638	L798_01850	A0A067QS49	A0A067QVQ6	E3 ubiquitin-protein ligase.	Ubiquitin.	0.770
L798_01638	L798_08803	A0A067QS49	A0A067R2I5	E3 ubiquitin-protein ligase.	Ubiquitin.	0.821
L798_01638	L798_11683	A0A067QS49	A0A067QXB3	E3 ubiquitin-protein ligase.	Ubiquitin.	0.802
L798_01638	L798_14995	A0A067QS49	A0A067QWD5	E3 ubiquitin-protein ligase.	Ubiquitin.	0.770
L798_01850	L798_01638	A0A067QVQ6	A0A067QS49	Ubiquitin.	E3 ubiquitin-protein ligase.	0.770
L798_01850	L798_08803	A0A067QVQ6	A0A067R2I5	Ubiquitin.	Ubiquitin.	0.912
L798_01850	L798_11683	A0A067QVQ6	A0A067QXB3	Ubiquitin.	Ubiquitin.	0.937
L798_01850	L798_13431	A0A067QVQ6	A0A067QPN9	Ubiquitin.	Protein neuralized.	0.404
L798_08803	L798_01638	A0A067R2I5	A0A067QS49	Ubiquitin.	E3 ubiquitin-protein ligase.	0.821
L798_08803	L798_01850	A0A067R2I5	A0A067QVQ6	Ubiquitin.	Ubiquitin.	0.912
L798_08803	L798_11683	A0A067R2I5	A0A067QXB3	Ubiquitin.	Ubiquitin.	0.999
L798_08803	L798_14995	A0A067R2I5	A0A067QWD5	Ubiquitin.	Ubiquitin.	0.912
L798_10978	L798_13431	A0A067QXN1	A0A067QPN9	E3 ubiquitin-protein ligase MIB1.	Protein neuralized.	0.589
L798_11683	L798_01638	A0A067QXB3	A0A067QS49	Ubiquitin.	E3 ubiquitin-protein ligase.	0.802
L798_11683	L798_01850	A0A067QXB3	A0A067QVQ6	Ubiquitin.	Ubiquitin.	0.937
L798_11683	L798_08803	A0A067QXB3	A0A067R2I5	Ubiquitin.	Ubiquitin.	0.999
L798_11683	L798_14995	A0A067QXB3	A0A067QWD5	Ubiquitin.	Ubiquitin.	0.953
L798_13431	L798_01850	A0A067QPN9	A0A067QVQ6	Protein neuralized.	Ubiquitin.	0.404
L798_13431	L798_10978	A0A067QPN9	A0A067QXN1	Protein neuralized.	E3 ubiquitin-protein ligase MIB1.	0.589
L798_13431	L798_14995	A0A067QPN9	A0A067QWD5	Protein neuralized.	Ubiquitin.	0.404