13 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_13674	Protein E(Sev)2B. (211 aa)
	L798_11002	E3 ubiquitin-protein ligase CBL-B. (737 aa)
	L798_11683	Ubiquitin. (128 aa)
	L798_14995	Ubiquitin. (230 aa)
	L798_10395	Phosphatidylinositol 3-kinase regulatory subunit gamma. (569 aa)
	L798_01850	Ubiquitin. (229 aa)
	L798_01072	Guanine nucleotide-releasing factor 2. (1282 aa)
	L798_06050	Protein daughter of sevenless. (814 aa)
	L798_04523	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1060 aa)
	L798_07660	Phosphatidylinositol 3-kinase regulatory subunit alpha. (844 aa)
	L798_11905	Uncharacterized protein. (219 aa)
	L798_08803	Ubiquitin. (156 aa)
	L798_09029	Tyrosine-protein kinase. (714 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_01072	L798_04523	A0A067QTZ8	A0A067RK76	Guanine nucleotide-releasing factor 2.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.415
L798_01072	L798_11002	A0A067QTZ8	A0A067QZW8	Guanine nucleotide-releasing factor 2.	E3 ubiquitin-protein ligase CBL-B.	0.812
L798_01072	L798_11905	A0A067QTZ8	A0A067R420	Guanine nucleotide-releasing factor 2.	Uncharacterized protein.	0.982
L798_01072	L798_13674	A0A067QTZ8	A0A067QZD3	Guanine nucleotide-releasing factor 2.	Protein E(Sev)2B.	0.909
L798_01850	L798_08803	A0A067QVQ6	A0A067R2I5	Ubiquitin.	Ubiquitin.	0.912
L798_01850	L798_09029	A0A067QVQ6	A0A067R294	Ubiquitin.	Tyrosine-protein kinase.	0.447
L798_01850	L798_11002	A0A067QVQ6	A0A067QZW8	Ubiquitin.	E3 ubiquitin-protein ligase CBL-B.	0.746
L798_01850	L798_11683	A0A067QVQ6	A0A067QXB3	Ubiquitin.	Ubiquitin.	0.937
L798_01850	L798_13674	A0A067QVQ6	A0A067QZD3	Ubiquitin.	Protein E(Sev)2B.	0.540
L798_04523	L798_01072	A0A067RK76	A0A067QTZ8	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Guanine nucleotide-releasing factor 2.	0.415
L798_04523	L798_06050	A0A067RK76	A0A067RL73	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Protein daughter of sevenless.	0.612
L798_04523	L798_07660	A0A067RK76	A0A067RDP5	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 3-kinase regulatory subunit alpha.	0.994
L798_04523	L798_10395	A0A067RK76	A0A067QW74	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 3-kinase regulatory subunit gamma.	0.994
L798_04523	L798_11002	A0A067RK76	A0A067QZW8	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	E3 ubiquitin-protein ligase CBL-B.	0.687
L798_04523	L798_13674	A0A067RK76	A0A067QZD3	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Protein E(Sev)2B.	0.747
L798_06050	L798_04523	A0A067RL73	A0A067RK76	Protein daughter of sevenless.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.612
L798_06050	L798_07660	A0A067RL73	A0A067RDP5	Protein daughter of sevenless.	Phosphatidylinositol 3-kinase regulatory subunit alpha.	0.701
L798_06050	L798_10395	A0A067RL73	A0A067QW74	Protein daughter of sevenless.	Phosphatidylinositol 3-kinase regulatory subunit gamma.	0.701
L798_06050	L798_11905	A0A067RL73	A0A067R420	Protein daughter of sevenless.	Uncharacterized protein.	0.776
L798_06050	L798_13674	A0A067RL73	A0A067QZD3	Protein daughter of sevenless.	Protein E(Sev)2B.	0.998