STRINGSTRING
L798_00940 L798_00940 L798_11669 L798_11669 L798_12213 L798_12213 L798_04017 L798_04017 L798_03122 L798_03122 L798_14993 L798_14993 L798_00736 L798_00736 L798_06090 L798_06090 L798_06110 L798_06110 L798_03387 L798_03387 L798_03391 L798_03391 L798_12398 L798_12398 L798_12829 L798_12829 L798_02128 L798_02128 L798_06983 L798_06983 L798_13400 L798_13400 L798_07180 L798_07180 L798_06694 L798_06694 L798_09610 L798_09610 L798_10966 L798_10966 L798_03025 L798_03025 L798_03289 L798_03289 L798_06544 L798_06544 L798_07107 L798_07107 L798_07971 L798_07971 L798_09101 L798_09101 L798_09653 L798_09653 L798_09611 L798_09611 L798_15429 L798_15429 L798_11200 L798_11200
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L798_00940Uncharacterized protein. (529 aa)
L798_11669DNA-directed RNA polymerases I, II, and III subunit RPABC2. (132 aa)
L798_12213TFIIH basal transcription factor complex helicase subunit. (761 aa)
L798_04017DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1063 aa)
L798_03122Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
L798_14993Cell division protein kinase 7; Belongs to the protein kinase superfamily. (347 aa)
L798_00736Cyclin-H; Belongs to the cyclin family. (333 aa)
L798_06090General transcription factor IIH subunit 1. (562 aa)
L798_06110TATA box-binding protein-like protein 1. (281 aa)
L798_03387DNA-directed RNA polymerases I, II, and III subunit RPABC3. (95 aa)
L798_03391DNA-directed RNA polymerases I, II, and III subunit RPABC3. (109 aa)
L798_12398DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
L798_12829General transcription factor IIH subunit 3. (296 aa)
L798_02128DNA-directed RNA polymerase I subunit RPA49. (375 aa)
L798_06983General transcription factor IIH subunit 5. (73 aa)
L798_13400DNA-directed RNA polymerase I subunit RPA43. (1166 aa)
L798_07180DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1655 aa)
L798_06694Acidic repeat-containing protein. (875 aa)
L798_09610Uncharacterized protein. (154 aa)
L798_10966DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
L798_03025DNA-directed RNA polymerases I, II, and III subunit RPABC1. (252 aa)
L798_03289DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
L798_06544Uncharacterized protein. (177 aa)
L798_07107General transcription factor IIH subunit. (414 aa)
L798_07971DNA-directed RNA polymerases I and III subunit RPAC1. (340 aa)
L798_09101CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (318 aa)
L798_09653General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
L798_09611Nucleolar transcription factor 1. (516 aa)
L798_15429DNA excision repair protein haywire. (806 aa)
L798_11200TATA-box-binding protein. (297 aa)
Your Current Organism:
Zootermopsis nevadensis
NCBI taxonomy Id: 136037
Other names: Z. nevadensis
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