48 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_11805	Transcription initiation factor TFIID subunit 13. (126 aa)
	L798_11200	TATA-box-binding protein. (297 aa)
	L798_15429	DNA excision repair protein haywire. (806 aa)
	L798_14322	Transcription initiation factor TFIID subunit 5. (662 aa)
	L798_10965	Transcription initiation factor IIB. (339 aa)
	L798_09653	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
	L798_13497	Transcription initiation factor TFIID subunit. (1908 aa)
	L798_09771	Transcription initiation factor TFIID subunit 7. (440 aa)
	L798_12760	Transcription initiation factor TFIID subunit 12. (254 aa)
	L798_00458	DNA-directed RNA polymerase II subunit RPB11. (117 aa)
	L798_03025	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (252 aa)
	L798_12398	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
	L798_03391	DNA-directed RNA polymerases I, II, and III subunit RPABC3. (109 aa)
	L798_03387	DNA-directed RNA polymerases I, II, and III subunit RPABC3. (95 aa)
	L798_08987	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1900 aa)
	L798_13005	Transcription initiation factor TFIID subunit 6. (640 aa)
	L798_05117	Transcription initiation factor IIE subunit beta. (252 aa)
	L798_04780	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	L798_06110	TATA box-binding protein-like protein 1. (281 aa)
	L798_06090	General transcription factor IIH subunit 1. (562 aa)
	L798_14979	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (144 aa)
	L798_07319	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (117 aa)
	L798_07107	General transcription factor IIH subunit. (414 aa)
	L798_06544	Uncharacterized protein. (177 aa)
	L798_14715	Transcription initiation factor TFIID subunit 4. (1072 aa)
	L798_11669	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (132 aa)
	L798_03289	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	L798_07279	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (582 aa)
	L798_09101	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (318 aa)
	L798_06790	General transcription factor IIE subunit 1. (416 aa)
	L798_11936	Uncharacterized protein. (337 aa)
	L798_07724	Transcription initiation factor TFIID subunit 2. (1276 aa)
	L798_06983	General transcription factor IIH subunit 5. (73 aa)
	L798_06455	DUF2236 domain-containing protein. (595 aa)
	L798_05119	Transcription initiation factor TFIID subunit 11. (253 aa)
	L798_11282	DNA-directed RNA polymerase II subunit RPB3. (276 aa)
	L798_04605	Uncharacterized protein. (48 aa)
	L798_08908	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
	L798_09302	Transcription initiation factor IIA subunit 1. (391 aa)
	L798_08621	DNA-directed RNA polymerase II subunit RPB7. (173 aa)
	L798_14409	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (540 aa)
	L798_02399	DUF2236 domain-containing protein. (321 aa)
	L798_01662	Transcription initiation factor TFIID subunit 9. (276 aa)
	L798_00736	Cyclin-H; Belongs to the cyclin family. (333 aa)
	L798_14993	Cell division protein kinase 7; Belongs to the protein kinase superfamily. (347 aa)
	L798_12213	TFIIH basal transcription factor complex helicase subunit. (761 aa)
	L798_07082	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (264 aa)
	L798_12829	General transcription factor IIH subunit 3. (296 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_00458	L798_00736	A0A067RDQ4	A0A067QJI2	DNA-directed RNA polymerase II subunit RPB11.	Cyclin-H; Belongs to the cyclin family.	0.853
L798_00458	L798_01662	A0A067RDQ4	A0A067QIL3	DNA-directed RNA polymerase II subunit RPB11.	Transcription initiation factor TFIID subunit 9.	0.740
L798_00458	L798_02399	A0A067RDQ4	A0A067QHU4	DNA-directed RNA polymerase II subunit RPB11.	DUF2236 domain-containing protein.	0.887
L798_00458	L798_03025	A0A067RDQ4	A0A067RE10	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.998
L798_00458	L798_03289	A0A067RDQ4	A0A067RG04	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
L798_00458	L798_03387	A0A067RDQ4	A0A067RME6	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.998
L798_00458	L798_03391	A0A067RDQ4	A0A067RPW6	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.958
L798_00458	L798_04605	A0A067RDQ4	A0A067RA32	DNA-directed RNA polymerase II subunit RPB11.	Uncharacterized protein.	0.934
L798_00458	L798_04780	A0A067RDQ4	A0A067RJ70	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
L798_00458	L798_05117	A0A067RDQ4	A0A067RKC2	DNA-directed RNA polymerase II subunit RPB11.	Transcription initiation factor IIE subunit beta.	0.953
L798_00458	L798_05119	A0A067RDQ4	A0A067R8J4	DNA-directed RNA polymerase II subunit RPB11.	Transcription initiation factor TFIID subunit 11.	0.779
L798_00458	L798_06090	A0A067RDQ4	A0A067RJ16	DNA-directed RNA polymerase II subunit RPB11.	General transcription factor IIH subunit 1.	0.942
L798_00458	L798_06110	A0A067RDQ4	A0A067RJ31	DNA-directed RNA polymerase II subunit RPB11.	TATA box-binding protein-like protein 1.	0.786
L798_00458	L798_06455	A0A067RDQ4	A0A067R687	DNA-directed RNA polymerase II subunit RPB11.	DUF2236 domain-containing protein.	0.899
L798_00458	L798_06544	A0A067RDQ4	A0A067RGU3	DNA-directed RNA polymerase II subunit RPB11.	Uncharacterized protein.	0.855
L798_00458	L798_06790	A0A067RDQ4	A0A067R446	DNA-directed RNA polymerase II subunit RPB11.	General transcription factor IIE subunit 1.	0.951
L798_00458	L798_06983	A0A067RDQ4	A0A067R519	DNA-directed RNA polymerase II subunit RPB11.	General transcription factor IIH subunit 5.	0.808
L798_00458	L798_07082	A0A067RDQ4	A0A067RTL9	DNA-directed RNA polymerase II subunit RPB11.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.981
L798_00458	L798_07107	A0A067RDQ4	A0A067RH91	DNA-directed RNA polymerase II subunit RPB11.	General transcription factor IIH subunit.	0.953
L798_00458	L798_07279	A0A067RDQ4	A0A067RFB0	DNA-directed RNA polymerase II subunit RPB11.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.975