STRINGSTRING
L798_08621 L798_08621 L798_08908 L798_08908 L798_03132 L798_03132 L798_04066 L798_04066 L798_08386 L798_08386 L798_04065 L798_04065 L798_09149 L798_09149 L798_09578 L798_09578 L798_11282 L798_11282 L798_06000 L798_06000 L798_06307 L798_06307 L798_07795 L798_07795 L798_04198 L798_04198 L798_10705 L798_10705 L798_06455 L798_06455 L798_12578 L798_12578 L798_07381 L798_07381 L798_07316 L798_07316 L798_11278 L798_11278 L798_07202 L798_07202 L798_04287 L798_04287 L798_07082 L798_07082 L798_12829 L798_12829 L798_12398 L798_12398 L798_02375 L798_02375 L798_03391 L798_03391 L798_02053 L798_02053 L798_03387 L798_03387 L798_08987 L798_08987 L798_04780 L798_04780 L798_06090 L798_06090 L798_00295 L798_00295 L798_05389 L798_05389 L798_07107 L798_07107 L798_15238 L798_15238 L798_07193 L798_07193 L798_00294 L798_00294 L798_06983 L798_06983 L798_11936 L798_11936 L798_13679 L798_13679 L798_09288 L798_09288 L798_09101 L798_09101 L798_14634 L798_14634 L798_09653 L798_09653 L798_15429 L798_15429 L798_09785 L798_09785 L798_11669 L798_11669 L798_00991 L798_00991 L798_12213 L798_12213 L798_13661 L798_13661 L798_14348 L798_14348 L798_14993 L798_14993 L798_00585 L798_00585 L798_00736 L798_00736 L798_01373 L798_01373 L798_02399 L798_02399 L798_03289 L798_03289 L798_07279 L798_07279 L798_01091 L798_01091 L798_08806 L798_08806 L798_03025 L798_03025 L798_00458 L798_00458
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
L798_08621DNA-directed RNA polymerase II subunit RPB7. (173 aa)
L798_08908DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
L798_03132Cyclin-dependent kinase 2-interacting protein. (207 aa)
L798_04066Cyclin-T. (1260 aa)
L798_08386Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (163 aa)
L798_04065Cyclin-T; Belongs to the cyclin family. (185 aa)
L798_09149Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (116 aa)
L798_09578Parafibromin. (507 aa)
L798_11282DNA-directed RNA polymerase II subunit RPB3. (276 aa)
L798_06000AF4/FMR2 family member 4. (1428 aa)
L798_06307Another transcription unit protein. (395 aa)
L798_07795Negative elongation factor E. (271 aa)
L798_04198Transcription elongation factor B polypeptide 3. (674 aa)
L798_10705Transcription elongation factor B polypeptide 2. (115 aa)
L798_06455DUF2236 domain-containing protein. (595 aa)
L798_12578Uncharacterized protein. (1011 aa)
L798_07381WD repeat-containing protein 61. (320 aa)
L798_07316Vesicle transport through interaction with t-SNAREs-like protein 1B. (112 aa)
L798_11278Transcription elongation factor S-II. (296 aa)
L798_07202Nuclear cap-binding protein subunit 1. (805 aa)
L798_04287Transcription elongation factor SPT6. (1719 aa)
L798_07082General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (264 aa)
L798_12829General transcription factor IIH subunit 3. (296 aa)
L798_12398DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
L798_02375Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (120 aa)
L798_03391DNA-directed RNA polymerases I, II, and III subunit RPABC3. (109 aa)
L798_02053Negative elongation factor A. (518 aa)
L798_03387DNA-directed RNA polymerases I, II, and III subunit RPABC3. (95 aa)
L798_08987DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1900 aa)
L798_04780DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
L798_06090General transcription factor IIH subunit 1. (562 aa)
L798_00295Cell division protein kinase 9; Belongs to the protein kinase superfamily. (401 aa)
L798_05389Uncharacterized protein. (684 aa)
L798_07107General transcription factor IIH subunit. (414 aa)
L798_15238FACT complex subunit spt16. (1132 aa)
L798_07193Protein AF-9. (792 aa)
L798_00294Cell division protein kinase 9. (286 aa)
L798_06983General transcription factor IIH subunit 5. (73 aa)
L798_11936Uncharacterized protein. (337 aa)
L798_13679FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (756 aa)
L798_09288RNA polymerase II-associated factor 1-like protein. (529 aa)
L798_09101CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (318 aa)
L798_14634Ell-associated factor Eaf. (332 aa)
L798_09653General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
L798_15429DNA excision repair protein haywire. (806 aa)
L798_09785RNA polymerase-associated protein CTR9-like protein. (1230 aa)
L798_11669DNA-directed RNA polymerases I, II, and III subunit RPABC2. (132 aa)
L798_00991RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (862 aa)
L798_12213TFIIH basal transcription factor complex helicase subunit. (761 aa)
L798_13661Chitin-binding type-2 domain-containing protein. (149 aa)
L798_14348IWS1-like protein. (287 aa)
L798_14993Cell division protein kinase 7; Belongs to the protein kinase superfamily. (347 aa)
L798_00585RNA polymerase-associated protein Rtf1. (710 aa)
L798_00736Cyclin-H; Belongs to the cyclin family. (333 aa)
L798_01373Cyclin-related protein FAM58A; Belongs to the cyclin family. (252 aa)
L798_02399DUF2236 domain-containing protein. (321 aa)
L798_03289DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
L798_07279Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (582 aa)
L798_01091Uncharacterized protein. (259 aa)
L798_08806Cyclin-K; Belongs to the cyclin family. (446 aa)
L798_03025DNA-directed RNA polymerases I, II, and III subunit RPABC1. (252 aa)
L798_00458DNA-directed RNA polymerase II subunit RPB11. (117 aa)
Your Current Organism:
Zootermopsis nevadensis
NCBI taxonomy Id: 136037
Other names: Z. nevadensis
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