28 items (Zootermopsis nevadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L798_06671	Leucine-rich repeat serine/threonine-protein kinase 1. (2540 aa)
	L798_04219	Rho GTPase-activating protein. (1073 aa)
	L798_05121	Cold shock domain-containing protein E1. (938 aa)
	L798_05109	ELMO domain-containing protein 1. (312 aa)
	L798_10034	Gamma-glutamylcyclotransferase. (179 aa)
	L798_07447	KxDL domain-containing protein. (222 aa)
	L798_11943	Ras-like GTP-binding protein Rho1. (192 aa)
	L798_11905	Uncharacterized protein. (219 aa)
	L798_08803	Ubiquitin. (156 aa)
	L798_11002	E3 ubiquitin-protein ligase CBL-B. (737 aa)
	L798_11184	Engulfment and cell motility protein 1. (729 aa)
	L798_11683	Ubiquitin. (128 aa)
	L798_00913	KH_dom_type_1 domain-containing protein. (194 aa)
	L798_01386	Ras-like protein. (156 aa)
	L798_06729	KH domain-containing, RNA-binding, signal transduction-associated protein 2. (218 aa)
	L798_12179	Ubiquitin. (77 aa)
	L798_02525	Ras-like protein 1. (191 aa)
	L798_02883	Rho-related GTP-binding protein RhoE. (225 aa)
	L798_00992	Ras-like GTP-binding protein Rho1. (208 aa)
	L798_00862	Engulfment and cell motility protein 1. (722 aa)
	L798_00994	Ras-like GTP-binding protein Rho1. (192 aa)
	L798_01850	Ubiquitin. (229 aa)
	L798_14995	Ubiquitin. (230 aa)
	L798_08699	Ras GTPase-activating protein 1. (930 aa)
	L798_12707	Uncharacterized protein; Belongs to the DOCK family. (1700 aa)
	L798_06726	KH domain-containing, RNA-binding, signal transduction-associated protein 3. (291 aa)
	L798_06725	Uncharacterized protein. (69 aa)
	L798_07331	ELMO domain-containing protein 3. (328 aa)

Your Current Organism:

Zootermopsis nevadensis

NCBI taxonomy Id: 136037
Other names: Z. nevadensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L798_00862	L798_00992	A0A067QKS4	A0A067QJV6	Engulfment and cell motility protein 1.	Ras-like GTP-binding protein Rho1.	0.468
L798_00862	L798_00994	A0A067QKS4	A0A067QMA2	Engulfment and cell motility protein 1.	Ras-like GTP-binding protein Rho1.	0.468
L798_00862	L798_02883	A0A067QKS4	A0A067QJ14	Engulfment and cell motility protein 1.	Rho-related GTP-binding protein RhoE.	0.468
L798_00862	L798_11905	A0A067QKS4	A0A067R420	Engulfment and cell motility protein 1.	Uncharacterized protein.	0.774
L798_00862	L798_11943	A0A067QKS4	A0A067R453	Engulfment and cell motility protein 1.	Ras-like GTP-binding protein Rho1.	0.468
L798_00862	L798_12707	A0A067QKS4	A0A067RRZ8	Engulfment and cell motility protein 1.	Uncharacterized protein; Belongs to the DOCK family.	0.882
L798_00992	L798_00862	A0A067QJV6	A0A067QKS4	Ras-like GTP-binding protein Rho1.	Engulfment and cell motility protein 1.	0.468
L798_00992	L798_04219	A0A067QJV6	A0A067RBM2	Ras-like GTP-binding protein Rho1.	Rho GTPase-activating protein.	0.717
L798_00992	L798_06671	A0A067QJV6	A0A067RI47	Ras-like GTP-binding protein Rho1.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.827
L798_00992	L798_08699	A0A067QJV6	A0A067RS08	Ras-like GTP-binding protein Rho1.	Ras GTPase-activating protein 1.	0.406
L798_00992	L798_08803	A0A067QJV6	A0A067R2I5	Ras-like GTP-binding protein Rho1.	Ubiquitin.	0.430
L798_00992	L798_11184	A0A067QJV6	A0A067QYM9	Ras-like GTP-binding protein Rho1.	Engulfment and cell motility protein 1.	0.468
L798_00992	L798_11905	A0A067QJV6	A0A067R420	Ras-like GTP-binding protein Rho1.	Uncharacterized protein.	0.428
L798_00992	L798_11943	A0A067QJV6	A0A067R453	Ras-like GTP-binding protein Rho1.	Ras-like GTP-binding protein Rho1.	0.901
L798_00992	L798_12707	A0A067QJV6	A0A067RRZ8	Ras-like GTP-binding protein Rho1.	Uncharacterized protein; Belongs to the DOCK family.	0.522
L798_00994	L798_00862	A0A067QMA2	A0A067QKS4	Ras-like GTP-binding protein Rho1.	Engulfment and cell motility protein 1.	0.468
L798_00994	L798_04219	A0A067QMA2	A0A067RBM2	Ras-like GTP-binding protein Rho1.	Rho GTPase-activating protein.	0.717
L798_00994	L798_06671	A0A067QMA2	A0A067RI47	Ras-like GTP-binding protein Rho1.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.827
L798_00994	L798_08699	A0A067QMA2	A0A067RS08	Ras-like GTP-binding protein Rho1.	Ras GTPase-activating protein 1.	0.406
L798_00994	L798_08803	A0A067QMA2	A0A067R2I5	Ras-like GTP-binding protein Rho1.	Ubiquitin.	0.430