(5 nodes) Cellular response to interleukin-18 network (Monodelphis domestica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL18R1	Uncharacterized protein. (533 aa)
	F7EHK1_MONDO	Uncharacterized protein. (565 aa)
	LOC103102395	Uncharacterized protein. (207 aa)
	ENSMODP00000056105	Uncharacterized protein. (194 aa)
	LOC103101367	Uncharacterized protein. (211 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMODP00000056105	F7EHK1_MONDO	ENSMODP00000056105	ENSMODP00000002923	Uncharacterized protein.	Uncharacterized protein.	0.468
ENSMODP00000056105	IL18R1	ENSMODP00000056105	ENSMODP00000002903	Uncharacterized protein.	Uncharacterized protein.	0.551
ENSMODP00000056105	LOC103101367	ENSMODP00000056105	ENSMODP00000058784	Uncharacterized protein.	Uncharacterized protein.	0.847
ENSMODP00000056105	LOC103102395	ENSMODP00000056105	ENSMODP00000050860	Uncharacterized protein.	Uncharacterized protein.	0.872
F7EHK1_MONDO	ENSMODP00000056105	ENSMODP00000002923	ENSMODP00000056105	Uncharacterized protein.	Uncharacterized protein.	0.468
F7EHK1_MONDO	IL18R1	ENSMODP00000002923	ENSMODP00000002903	Uncharacterized protein.	Uncharacterized protein.	0.967
F7EHK1_MONDO	LOC103101367	ENSMODP00000002923	ENSMODP00000058784	Uncharacterized protein.	Uncharacterized protein.	0.895
F7EHK1_MONDO	LOC103102395	ENSMODP00000002923	ENSMODP00000050860	Uncharacterized protein.	Uncharacterized protein.	0.963
IL18R1	ENSMODP00000056105	ENSMODP00000002903	ENSMODP00000056105	Uncharacterized protein.	Uncharacterized protein.	0.551
IL18R1	F7EHK1_MONDO	ENSMODP00000002903	ENSMODP00000002923	Uncharacterized protein.	Uncharacterized protein.	0.967
IL18R1	LOC103101367	ENSMODP00000002903	ENSMODP00000058784	Uncharacterized protein.	Uncharacterized protein.	0.989
IL18R1	LOC103102395	ENSMODP00000002903	ENSMODP00000050860	Uncharacterized protein.	Uncharacterized protein.	0.998
LOC103101367	ENSMODP00000056105	ENSMODP00000058784	ENSMODP00000056105	Uncharacterized protein.	Uncharacterized protein.	0.847
LOC103101367	F7EHK1_MONDO	ENSMODP00000058784	ENSMODP00000002923	Uncharacterized protein.	Uncharacterized protein.	0.895
LOC103101367	IL18R1	ENSMODP00000058784	ENSMODP00000002903	Uncharacterized protein.	Uncharacterized protein.	0.989
LOC103101367	LOC103102395	ENSMODP00000058784	ENSMODP00000050860	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC103102395	ENSMODP00000056105	ENSMODP00000050860	ENSMODP00000056105	Uncharacterized protein.	Uncharacterized protein.	0.872
LOC103102395	F7EHK1_MONDO	ENSMODP00000050860	ENSMODP00000002923	Uncharacterized protein.	Uncharacterized protein.	0.963
LOC103102395	IL18R1	ENSMODP00000050860	ENSMODP00000002903	Uncharacterized protein.	Uncharacterized protein.	0.998
LOC103102395	LOC103101367	ENSMODP00000050860	ENSMODP00000058784	Uncharacterized protein.	Uncharacterized protein.	0.900