39 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDC42	Cell division cycle 42. (191 aa)
	ENSMODP00000050247	Uncharacterized protein. (247 aa)
	ENSMODP00000052385	Uncharacterized protein. (124 aa)
	ENSMODP00000053130	Uncharacterized protein. (71 aa)
	ENSMODP00000053249	Uncharacterized protein. (142 aa)
	RASL12	Uncharacterized protein. (270 aa)
	RAB4A	RAB4A, member RAS oncogene family. (312 aa)
	KRAS	GTPase KRas. (189 aa)
	ENSMODP00000041446	Uncharacterized protein. (156 aa)
	KRAS-2	GTPase KRas, N-terminally processed; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. Plays a role in promoting oncogenic events by inducing transcriptional silencing of tumor suppressor genes (TSGs) in colorectal cancer (CRC) cells in a ZNF304- dependent manner (By similarity); Belongs to the small GTPase superfamily. Ras family. (194 aa)
	RIT2	Ras like without CAAX 2. (187 aa)
	F7CI75_MONDO	Uncharacterized protein. (223 aa)
	ARF6	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	F7GJP0_MONDO	Uncharacterized protein. (193 aa)
	MRAS	Muscle RAS oncogene homolog. (208 aa)
	RIT1	Ras like without CAAX 1. (182 aa)
	RAB10	RAB10, member RAS oncogene family. (200 aa)
	RAP2C	RAP2C, member of RAS oncogene family. (183 aa)
	F6T9J4_MONDO	Uncharacterized protein. (191 aa)
	RAB11A	RAB11A, member RAS oncogene family. (269 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (183 aa)
	RAB1B	RAB1B, member RAS oncogene family. (201 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	RAB27A	RAB27A, member RAS oncogene family. (221 aa)
	LOC100026853	Uncharacterized protein. (267 aa)
	RAP1B	RAP1B, member of RAS oncogene family. (184 aa)
	RAB1A	RAB1A, member RAS oncogene family. (185 aa)
	RAP1A	Uncharacterized protein. (177 aa)
	RALB	RAS like proto-oncogene B. (206 aa)
	RAP2A	Uncharacterized protein. (183 aa)
	RAB11B	Uncharacterized protein. (220 aa)
	NRAS	GTPase NRas. (195 aa)
	ENSMODP00000049410	Uncharacterized protein. (186 aa)
	RERG	Uncharacterized protein. (199 aa)
	RASL11B	Uncharacterized protein. (254 aa)
	RAB27B	RAB27B, member RAS oncogene family. (238 aa)
	RAB4B	Uncharacterized protein. (288 aa)
	RALA	Uncharacterized protein. (501 aa)
	HRAS	GTPase NRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity; Belongs to the small GTPase superfamily. Ras family. (189 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	RAB11A	ENSMODP00000032219	ENSMODP00000012261	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	RAB11A, member RAS oncogene family.	0.549
ARF6	RAB11B	ENSMODP00000032219	ENSMODP00000048104	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.549
ARF6	RAB4A	ENSMODP00000032219	ENSMODP00000054809	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	RAB4A, member RAS oncogene family.	0.451
ARF6	RAB4B	ENSMODP00000032219	ENSMODP00000058268	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.451
CDC42	F7CI75_MONDO	ENSMODP00000032375	ENSMODP00000032833	Cell division cycle 42.	Uncharacterized protein.	0.901
CDC42	RAB7A	ENSMODP00000032375	ENSMODP00000010067	Cell division cycle 42.	RAB7A, member RAS oncogene family.	0.465
ENSMODP00000050247	RAB10	ENSMODP00000050247	ENSMODP00000019740	Uncharacterized protein.	RAB10, member RAS oncogene family.	0.537
ENSMODP00000050247	RAB11A	ENSMODP00000050247	ENSMODP00000012261	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.643
ENSMODP00000050247	RAB11B	ENSMODP00000050247	ENSMODP00000048104	Uncharacterized protein.	Uncharacterized protein.	0.642
ENSMODP00000050247	RAB7A	ENSMODP00000050247	ENSMODP00000010067	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.407
ENSMODP00000053130	RAB11A	ENSMODP00000053130	ENSMODP00000012261	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.410
ENSMODP00000053130	RAB11B	ENSMODP00000053130	ENSMODP00000048104	Uncharacterized protein.	Uncharacterized protein.	0.410
ENSMODP00000053130	RAB4A	ENSMODP00000053130	ENSMODP00000054809	Uncharacterized protein.	RAB4A, member RAS oncogene family.	0.419
ENSMODP00000053130	RAB4B	ENSMODP00000053130	ENSMODP00000058268	Uncharacterized protein.	Uncharacterized protein.	0.419
ENSMODP00000053130	RAB7A	ENSMODP00000053130	ENSMODP00000010067	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.426
F6T9J4_MONDO	RAB7A	ENSMODP00000017781	ENSMODP00000010067	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.465
F7CI75_MONDO	CDC42	ENSMODP00000032833	ENSMODP00000032375	Uncharacterized protein.	Cell division cycle 42.	0.901
F7CI75_MONDO	RAB7A	ENSMODP00000032833	ENSMODP00000010067	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.465
RAB10	ENSMODP00000050247	ENSMODP00000019740	ENSMODP00000050247	RAB10, member RAS oncogene family.	Uncharacterized protein.	0.537
RAB10	RAB11A	ENSMODP00000019740	ENSMODP00000012261	RAB10, member RAS oncogene family.	RAB11A, member RAS oncogene family.	0.482