41 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ELOB	Ubiquitin-like domain-containing protein. (113 aa)
	TCEA2	Transcription elongation factor A2. (306 aa)
	ELL3	Elongation factor for RNA polymerase II 3. (385 aa)
	F6ZN30_MONDO	TFIIS N-terminal domain-containing protein. (623 aa)
	ELL	Elongation factor for RNA polymerase II. (629 aa)
	SUPT6H	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
	ENSMODP00000055602	Uncharacterized protein. (451 aa)
	ENSMODP00000049180	Protein kinase domain-containing protein. (266 aa)
	LOC100016733	Uncharacterized protein. (1029 aa)
	SUPT5H	Transcription elongation factor SPT5. (1041 aa)
	SUPT4H1	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
	F6SB62_MONDO	Ubiquitin-like domain-containing protein. (100 aa)
	F6VDP4_MONDO	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (105 aa)
	LOC100032661	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
	CTR9	CTR9 homolog, Paf1/RNA polymerase II complex component. (1183 aa)
	F7G7Q2_MONDO	Uncharacterized protein. (302 aa)
	ELL2	Elongation factor for RNA polymerase II 2. (647 aa)
	CDK12	Protein kinase domain-containing protein. (1499 aa)
	ENSMODP00000049916	TFIIS N-terminal domain-containing protein. (748 aa)
	LOC100010993	Uncharacterized protein. (301 aa)
	SETD2	SET domain containing 2, histone lysine methyltransferase. (2565 aa)
	ENSMODP00000058852	Uncharacterized protein. (820 aa)
	PAF1	Uncharacterized protein. (551 aa)
	ELOA	TFIIS N-terminal domain-containing protein. (775 aa)
	CDK13	Cyclin dependent kinase 13. (1378 aa)
	CDC73	CDC73_N domain-containing protein. (371 aa)
	WDR61	WD repeat domain 61. (305 aa)
	LOC100012206	Uncharacterized protein. (344 aa)
	F7CPG0_MONDO	Uncharacterized protein. (263 aa)
	F7CPH0_MONDO	Uncharacterized protein. (272 aa)
	RTF1	RTF1 homolog, Paf1/RNA polymerase II complex component. (709 aa)
	ELOF1	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
	SUPT16H	SPT16 homolog, facilitates chromatin remodeling subunit. (1047 aa)
	PCID2	PCI domain containing 2. (399 aa)
	F6YD76_MONDO	Uncharacterized protein. (527 aa)
	LEO1	LEO1 homolog, Paf1/RNA polymerase II complex component. (668 aa)
	GTF2F1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (243 aa)
	F6WG96_MONDO	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (243 aa)
	F6VUC1_MONDO	Uncharacterized protein. (301 aa)
	POLR2I	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
	TCEA3	Transcription elongation factor A3. (336 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC73	CDK12	ENSMODP00000015307	ENSMODP00000052554	CDC73_N domain-containing protein.	Protein kinase domain-containing protein.	0.739
CDC73	CDK13	ENSMODP00000015307	ENSMODP00000015834	CDC73_N domain-containing protein.	Cyclin dependent kinase 13.	0.739
CDC73	CTR9	ENSMODP00000015307	ENSMODP00000026715	CDC73_N domain-containing protein.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.985
CDC73	ELL	ENSMODP00000015307	ENSMODP00000058244	CDC73_N domain-containing protein.	Elongation factor for RNA polymerase II.	0.559
CDC73	ELL2	ENSMODP00000015307	ENSMODP00000025101	CDC73_N domain-containing protein.	Elongation factor for RNA polymerase II 2.	0.570
CDC73	ELL3	ENSMODP00000015307	ENSMODP00000022138	CDC73_N domain-containing protein.	Elongation factor for RNA polymerase II 3.	0.559
CDC73	ELOA	ENSMODP00000015307	ENSMODP00000016070	CDC73_N domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.697
CDC73	ELOB	ENSMODP00000015307	ENSMODP00000020643	CDC73_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.755
CDC73	ELOF1	ENSMODP00000015307	ENSMODP00000008292	CDC73_N domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.856
CDC73	ENSMODP00000049180	ENSMODP00000015307	ENSMODP00000049180	CDC73_N domain-containing protein.	Protein kinase domain-containing protein.	0.456
CDC73	ENSMODP00000049916	ENSMODP00000015307	ENSMODP00000049916	CDC73_N domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.640
CDC73	ENSMODP00000058852	ENSMODP00000015307	ENSMODP00000058852	CDC73_N domain-containing protein.	Uncharacterized protein.	0.803
CDC73	F6SB62_MONDO	ENSMODP00000015307	ENSMODP00000036718	CDC73_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.755
CDC73	F6VDP4_MONDO	ENSMODP00000015307	ENSMODP00000036311	CDC73_N domain-containing protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.844
CDC73	F6VUC1_MONDO	ENSMODP00000015307	ENSMODP00000000385	CDC73_N domain-containing protein.	Uncharacterized protein.	0.493
CDC73	F6YD76_MONDO	ENSMODP00000015307	ENSMODP00000002829	CDC73_N domain-containing protein.	Uncharacterized protein.	0.952
CDC73	F6ZN30_MONDO	ENSMODP00000015307	ENSMODP00000023441	CDC73_N domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.695
CDC73	F7CPG0_MONDO	ENSMODP00000015307	ENSMODP00000011734	CDC73_N domain-containing protein.	Uncharacterized protein.	0.493
CDC73	F7CPH0_MONDO	ENSMODP00000015307	ENSMODP00000011732	CDC73_N domain-containing protein.	Uncharacterized protein.	0.493
CDC73	F7G7Q2_MONDO	ENSMODP00000015307	ENSMODP00000025403	CDC73_N domain-containing protein.	Uncharacterized protein.	0.493