9 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HNF1A	HNF1 homeobox A. (613 aa)
	CYP7B1	Uncharacterized protein; Belongs to the cytochrome P450 family. (462 aa)
	CYP7A1	Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family. (505 aa)
	CYP27A1	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family. (543 aa)
	CYP39A1	Cytochrome P450 family 39 subfamily A member 1; Belongs to the cytochrome P450 family. (469 aa)
	AMACR	Alpha-methylacyl-CoA racemase. (391 aa)
	K7DZY9_MONDO	Uncharacterized protein. (531 aa)
	ABCD3	ATP binding cassette subfamily D member 3. (668 aa)
	HSD17B10	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (293 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYP27A1	CYP7A1	ENSMODP00000019193	ENSMODP00000011028	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.	Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.	0.969
CYP27A1	CYP7B1	ENSMODP00000019193	ENSMODP00000010212	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.973
CYP27A1	K7DZY9_MONDO	ENSMODP00000019193	ENSMODP00000039090	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.563
CYP7A1	CYP27A1	ENSMODP00000011028	ENSMODP00000019193	Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.	0.969
CYP7B1	CYP27A1	ENSMODP00000010212	ENSMODP00000019193	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.	0.973
K7DZY9_MONDO	CYP27A1	ENSMODP00000039090	ENSMODP00000019193	Uncharacterized protein.	Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.	0.563