STRINGSTRING
WRAP53 WRAP53 HSPB7 HSPB7 EFTUD2 EFTUD2 USPL1 USPL1 HABP4 HABP4 OIP5 OIP5 PRPF31 PRPF31 PRPF3 PRPF3 FAM118B FAM118B ENSMODP00000051456 ENSMODP00000051456 LOC100011364 LOC100011364 ELL ELL NOLC1 NOLC1 ENSMODP00000059914 ENSMODP00000059914 ENSMODP00000059938 ENSMODP00000059938 ENSMODP00000060071 ENSMODP00000060071 FRG1 FRG1 NPAT NPAT EAF1 EAF1 SNRPC SNRPC ZPR1 ZPR1 FBL FBL HINFP HINFP ICE2 ICE2 RDM1 RDM1 SMNDC1 SMNDC1 ARIH1 ARIH1 DKC1 DKC1 TGS1 TGS1 XPO1 XPO1 EWSR1 EWSR1 USH1G USH1G PRPF4 PRPF4 ANGEL2 ANGEL2 SART3 SART3 LSM10 LSM10 GEMIN4 GEMIN4 AK6-2 AK6-2 LSG1 LSG1 ISG20 ISG20 AK6 AK6 F6XV26_MONDO F6XV26_MONDO NOP58 NOP58 COIL COIL TOE1 TOE1 ICE1 ICE1 PHAX PHAX GAR1 GAR1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WRAP53WD_REPEATS_REGION domain-containing protein. (294 aa)
HSPB7SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (166 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
USPL1USP domain-containing protein. (1115 aa)
HABP4Hyaluronan binding protein 4. (431 aa)
OIP5Mis18 domain-containing protein. (390 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
PRPF3Pre-mRNA processing factor 3. (683 aa)
FAM118BFamily with sequence similarity 118 member B. (348 aa)
ENSMODP00000051456Uncharacterized protein. (139 aa)
LOC100011364Tudor domain-containing protein. (288 aa)
ELLElongation factor for RNA polymerase II. (629 aa)
NOLC1LisH domain-containing protein. (792 aa)
ENSMODP00000059914Uncharacterized protein. (132 aa)
ENSMODP00000059938Uncharacterized protein. (538 aa)
ENSMODP00000060071Uncharacterized protein. (142 aa)
FRG1Uncharacterized protein. (385 aa)
NPATNuclear protein, coactivator of histone transcription. (1424 aa)
EAF1ELL associated factor 1. (259 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
ZPR1Uncharacterized protein. (462 aa)
FBLUncharacterized protein. (324 aa)
HINFPHistone H4 transcription factor. (518 aa)
ICE2Interactor of little elongation complex ELL subunit 2. (982 aa)
RDM1RAD52 motif containing 1. (223 aa)
SMNDC1Survival motor neuron domain containing 1. (238 aa)
ARIH1RBR-type E3 ubiquitin transferase. (556 aa)
DKC1Dyskerin pseudouridine synthase 1. (575 aa)
TGS1Trimethylguanosine synthase 1. (869 aa)
XPO1Exportin 1. (1071 aa)
EWSR1Uncharacterized protein. (658 aa)
USH1GUSH1 protein network component sans. (459 aa)
PRPF4Pre-mRNA processing factor 4. (523 aa)
ANGEL2Angel homolog 2. (546 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (977 aa)
LSM10LSM10, U7 small nuclear RNA associated. (123 aa)
GEMIN4Gem nuclear organelle associated protein 4. (1060 aa)
AK6-2Adenylate kinase isoenzyme 6; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. May be involved in regulation of Cajal body (CB) formation; Belongs to the adenylate kinase family. AK6 subfamily. (171 aa)
LSG1Large 60S subunit nuclear export GTPase 1. (608 aa)
ISG20Interferon stimulated exonuclease gene 20. (177 aa)
AK6Adenylate kinase isoenzyme 6; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. May be involved in regulation of Cajal body (CB) formation; Belongs to the adenylate kinase family. AK6 subfamily. (172 aa)
F6XV26_MONDOUncharacterized protein. (443 aa)
NOP58NOP58 ribonucleoprotein. (540 aa)
COILCoilin_N domain-containing protein. (558 aa)
TOE1Target of EGR1, exonuclease. (581 aa)
ICE1Uncharacterized protein. (2351 aa)
PHAXPhosphorylated adaptor for RNA export. (360 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (238 aa)
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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