44 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCL20	C-C motif chemokine. (102 aa)
	PDE4B	Phosphodiesterase. (500 aa)
	LOC100018887	SCY domain-containing protein. (120 aa)
	DPEP1	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (408 aa)
	CCL21	C-C motif chemokine ligand 21. (138 aa)
	PPIB	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
	LGALS3	Galectin. (281 aa)
	SRP54-2	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (488 aa)
	SRP54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
	ITGA9	Integrin subunit alpha 9; Belongs to the integrin alpha chain family. (1017 aa)
	CX3CL1	SCY domain-containing protein. (409 aa)
	LOC100012302	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (362 aa)
	PIKFYVE	Phosphoinositide kinase, FYVE-type zinc finger containing. (2090 aa)
	LOC100019238	EF-hand domain-containing protein; Belongs to the S-100 family. (91 aa)
	LOC100019177	Protein S100; Belongs to the S-100 family. (125 aa)
	CSF3R	Uncharacterized protein. (866 aa)
	CCL5	C-C motif chemokine ligand 5. (91 aa)
	CXCL8	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family. (101 aa)
	LOC100618318	C-X-C motif chemokine. (110 aa)
	ITGA1	Integrin subunit alpha 1; Belongs to the integrin alpha chain family. (1178 aa)
	VAV1	Vav guanine nucleotide exchange factor 1. (846 aa)
	F7AQZ1_MONDO	SCY domain-containing protein. (144 aa)
	CCL19	C-C motif chemokine. (96 aa)
	LOC100017283	C-C motif chemokine. (91 aa)
	LOC100017328	C-C motif chemokine. (95 aa)
	CCL25	SCY domain-containing protein. (138 aa)
	LOC103096620	SCY domain-containing protein. (103 aa)
	GBF1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1892 aa)
	EDN2	Uncharacterized protein. (178 aa)
	ENSMODP00000042114	SCY domain-containing protein. (97 aa)
	ENSMODP00000042431	Ig-like domain-containing protein. (187 aa)
	CCL22	SCY domain-containing protein. (80 aa)
	LOC100021456	C-C motif chemokine. (204 aa)
	ENSMODP00000050260	C-C motif chemokine. (121 aa)
	CXCL13	SCY domain-containing protein. (111 aa)
	BSG	Uncharacterized protein. (391 aa)
	LOC100012266	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (353 aa)
	CXADR	Ig-like domain-containing protein. (279 aa)
	VAV3	Vav guanine nucleotide exchange factor 3. (875 aa)
	SYK	Tyrosine-protein kinase. (588 aa)
	LOC100018815	MARVEL domain-containing protein. (186 aa)
	JAML	Ig-like domain-containing protein. (274 aa)
	CXCL11	C-X-C motif chemokine ligand 11. (87 aa)
	SLC37A4	Solute carrier family 37 member 4. (419 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSG	PPIB	ENSMODP00000051239	ENSMODP00000013555	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.582
CCL19	CCL20	ENSMODP00000038285	ENSMODP00000039409	C-C motif chemokine.	C-C motif chemokine.	0.519
CCL19	CCL21	ENSMODP00000038285	ENSMODP00000009776	C-C motif chemokine.	C-C motif chemokine ligand 21.	0.964
CCL19	CCL25	ENSMODP00000038285	ENSMODP00000039188	C-C motif chemokine.	SCY domain-containing protein.	0.770
CCL19	CCL5	ENSMODP00000038285	ENSMODP00000023864	C-C motif chemokine.	C-C motif chemokine ligand 5.	0.545
CCL19	CX3CL1	ENSMODP00000038285	ENSMODP00000016912	C-C motif chemokine.	SCY domain-containing protein.	0.555
CCL19	CXCL11	ENSMODP00000038285	ENSMODP00000057742	C-C motif chemokine.	C-X-C motif chemokine ligand 11.	0.675
CCL19	CXCL13	ENSMODP00000038285	ENSMODP00000050286	C-C motif chemokine.	SCY domain-containing protein.	0.594
CCL19	F7AQZ1_MONDO	ENSMODP00000038285	ENSMODP00000037542	C-C motif chemokine.	SCY domain-containing protein.	0.653
CCL19	LOC100012266	ENSMODP00000038285	ENSMODP00000051903	C-C motif chemokine.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.796
CCL19	LOC100012302	ENSMODP00000038285	ENSMODP00000019358	C-C motif chemokine.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.796
CCL19	LOC100017283	ENSMODP00000038285	ENSMODP00000038527	C-C motif chemokine.	C-C motif chemokine.	0.543
CCL19	LOC100017328	ENSMODP00000038285	ENSMODP00000038528	C-C motif chemokine.	C-C motif chemokine.	0.486
CCL19	LOC100618318	ENSMODP00000038285	ENSMODP00000023943	C-C motif chemokine.	C-X-C motif chemokine.	0.528
CCL20	CCL19	ENSMODP00000039409	ENSMODP00000038285	C-C motif chemokine.	C-C motif chemokine.	0.519
CCL20	CCL21	ENSMODP00000039409	ENSMODP00000009776	C-C motif chemokine.	C-C motif chemokine ligand 21.	0.438
CCL20	CCL22	ENSMODP00000039409	ENSMODP00000043576	C-C motif chemokine.	SCY domain-containing protein.	0.444
CCL20	CCL25	ENSMODP00000039409	ENSMODP00000039188	C-C motif chemokine.	SCY domain-containing protein.	0.551
CCL20	CCL5	ENSMODP00000039409	ENSMODP00000023864	C-C motif chemokine.	C-C motif chemokine ligand 5.	0.713
CCL20	CX3CL1	ENSMODP00000039409	ENSMODP00000016912	C-C motif chemokine.	SCY domain-containing protein.	0.567