42 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ERCC3	ERCC excision repair 3, TFIIH core complex helicase subunit. (783 aa)
	STRC	Stereocilin. (1776 aa)
	TPRN	Uncharacterized protein. (868 aa)
	SLC44A4	Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family. (717 aa)
	JAG2	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1247 aa)
	LHFPL5	LHFPL tetraspan subfamily member 5. (219 aa)
	DLX3	Distal-less homeobox 3. (286 aa)
	PDZD7	PDZ domain-containing protein. (686 aa)
	USH1C	USH1 protein network component harmonin. (545 aa)
	USH2A	Uncharacterized protein. (1547 aa)
	WDPCP	WD repeat containing planar cell polarity effector. (720 aa)
	CLRN2	Clarin 2. (232 aa)
	GSDME	Gasdermin E. (500 aa)
	MCOLN3	Mucolipin 3. (569 aa)
	REST	RE1 silencing transcription factor. (973 aa)
	LRRC1	Leucine rich repeat containing 1. (503 aa)
	MYO6	Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1278 aa)
	CLRN1	Uncharacterized protein. (231 aa)
	PTPRQ	Protein tyrosine phosphatase receptor type Q. (3386 aa)
	ENSMODP00000050574	Uncharacterized protein. (289 aa)
	SLC4A7	Anion exchange protein. (1245 aa)
	DLL1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (734 aa)
	SEC24B	SEC24 homolog B, COPII coat complex component. (1099 aa)
	PCDH15	Protocadherin related 15. (1836 aa)
	S1PR2	Sphingosine-1-phosphate receptor 2; Belongs to the G-protein coupled receptor 1 family. (398 aa)
	GRXCR1	Glutaredoxin and cysteine rich domain containing 1. (293 aa)
	GRXCR2	Glutaredoxin and cysteine rich domain containing 2. (248 aa)
	WHRN	Whirlin. (970 aa)
	TMEM132E	Uncharacterized protein. (561 aa)
	PAFAH1B1	Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] (409 aa)
	JAG1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1276 aa)
	CDH23	Uncharacterized protein. (3041 aa)
	ERCC2	ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
	PLS1	Plastin 1. (606 aa)
	ATOH1	Atonal bHLH transcription factor 1. (380 aa)
	FGF2	Fibroblast growth factor 2; Acts as a ligand for FGFR1, FGFR2, FGFR3 and FGFR4. Also acts as an integrin ligand which is required for FGF2 signaling. Binds to integrin ITGAV:ITGB3. Plays an important role in the regulation of cell survival, cell division, cell differentiation and cell migration. Functions as a potent mitogen in vitro. Can induce angiogenesis. Belongs to the heparin-binding growth factors family. (156 aa)
	ENSMODP00000057264	PDZ domain-containing protein. (172 aa)
	RIPOR2	PL48 domain-containing protein. (1046 aa)
	SLITRK6	SLIT and NTRK like family member 6. (841 aa)
	SCRIB	Scribble planar cell polarity protein. (1599 aa)
	LOC103102723	Uncharacterized protein. (258 aa)
	SLC9A3R1	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. (366 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATOH1	DLL1	ENSMODP00000024053	ENSMODP00000049507	Atonal bHLH transcription factor 1.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.431
CDH23	GRXCR1	ENSMODP00000027503	ENSMODP00000035782	Uncharacterized protein.	Glutaredoxin and cysteine rich domain containing 1.	0.659
CDH23	LHFPL5	ENSMODP00000027503	ENSMODP00000017180	Uncharacterized protein.	LHFPL tetraspan subfamily member 5.	0.450
CDH23	PCDH15	ENSMODP00000027503	ENSMODP00000047555	Uncharacterized protein.	Protocadherin related 15.	0.947
CDH23	USH1C	ENSMODP00000027503	ENSMODP00000008475	Uncharacterized protein.	USH1 protein network component harmonin.	0.954
CDH23	USH2A	ENSMODP00000027503	ENSMODP00000005098	Uncharacterized protein.	Uncharacterized protein.	0.646
CDH23	WHRN	ENSMODP00000027503	ENSMODP00000030259	Uncharacterized protein.	Whirlin.	0.620
CLRN1	ENSMODP00000057264	ENSMODP00000058962	ENSMODP00000057264	Uncharacterized protein.	PDZ domain-containing protein.	0.448
CLRN1	GRXCR2	ENSMODP00000058962	ENSMODP00000031492	Uncharacterized protein.	Glutaredoxin and cysteine rich domain containing 2.	0.403
CLRN1	PCDH15	ENSMODP00000058962	ENSMODP00000047555	Uncharacterized protein.	Protocadherin related 15.	0.549
CLRN1	PDZD7	ENSMODP00000058962	ENSMODP00000014960	Uncharacterized protein.	PDZ domain-containing protein.	0.448
CLRN1	STRC	ENSMODP00000058962	ENSMODP00000022156	Uncharacterized protein.	Stereocilin.	0.521
CLRN1	USH1C	ENSMODP00000058962	ENSMODP00000008475	Uncharacterized protein.	USH1 protein network component harmonin.	0.657
CLRN1	USH2A	ENSMODP00000058962	ENSMODP00000005098	Uncharacterized protein.	Uncharacterized protein.	0.619
CLRN1	WHRN	ENSMODP00000058962	ENSMODP00000030259	Uncharacterized protein.	Whirlin.	0.604
CLRN2	GRXCR2	ENSMODP00000001031	ENSMODP00000031492	Clarin 2.	Glutaredoxin and cysteine rich domain containing 2.	0.705
CLRN2	STRC	ENSMODP00000001031	ENSMODP00000022156	Clarin 2.	Stereocilin.	0.636
DLL1	ATOH1	ENSMODP00000049507	ENSMODP00000024053	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Atonal bHLH transcription factor 1.	0.431
DLL1	JAG1	ENSMODP00000049507	ENSMODP00000028532	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.551
DLL1	MYO6	ENSMODP00000049507	ENSMODP00000058703	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.440