STRINGSTRING
FBXO45 FBXO45 SEMA3A SEMA3A COL25A1 COL25A1 EDN1 EDN1 SULF2 SULF2 ITGA4 ITGA4 SLITRK6 SLITRK6 CHD7 CHD7 NTRK1 NTRK1 NTF4 NTF4 NRP1 NRP1 SULF1 SULF1 SERPINE2 SERPINE2 LRIG1 LRIG1 RNF165 RNF165 LRIG2 LRIG2 RET RET GABRA5 GABRA5 EDNRA EDNRA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FBXO45Uncharacterized protein. (284 aa)
SEMA3ASemaphorin 3A; Belongs to the semaphorin family. (772 aa)
COL25A1Collagen type XXV alpha 1 chain. (650 aa)
EDN1Endothelin 1. (214 aa)
SULF2Extracellular sulfatase; Exhibits arylsulfatase activity and highly specific endoglucosamine-6-sulfatase activity. It can remove sulfate from the C- 6 position of glucosamine within specific subregions of intact heparin. Belongs to the sulfatase family. (878 aa)
ITGA4Integrin subunit alpha 4; Belongs to the integrin alpha chain family. (1031 aa)
SLITRK6SLIT and NTRK like family member 6. (841 aa)
CHD7Chromodomain helicase DNA binding protein 7. (2999 aa)
NTRK1Tyrosine-protein kinase receptor. (739 aa)
NTF4Neurotrophin 4; Belongs to the NGF-beta family. (249 aa)
NRP1Neuropilin; Belongs to the neuropilin family. (922 aa)
SULF1Sulfatase 1. (1125 aa)
SERPINE2Serpin family E member 2; Belongs to the serpin family. (469 aa)
LRIG1Leucine rich repeats and immunoglobulin like domains 1. (1095 aa)
RNF165Ring finger protein 165. (364 aa)
LRIG2Leucine rich repeats and immunoglobulin like domains 2. (1107 aa)
RETProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1105 aa)
GABRA5Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (463 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (427 aa)
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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