STRINGSTRING
DCLRE1C DCLRE1C ASCC1 ASCC1 PALB2 PALB2 XRCC4 XRCC4 LIG4 LIG4 PAXX PAXX ZSWIM7 ZSWIM7 PHF21A PHF21A ATM ATM KDM1A KDM1A BRCA1 BRCA1 RAD23B RAD23B MLH1 MLH1 PMS1 PMS1 ASCC2 ASCC2 PMS2 PMS2 XPC XPC SWSAP1 SWSAP1 MLH3 MLH3 FANCD2 FANCD2 ERCC4 ERCC4 XPA XPA MSH6 MSH6 MSH2 MSH2 PRKDC PRKDC ERCC1 ERCC1 RCOR1 RCOR1 XRCC5 XRCC5 XRCC6 XRCC6 TP53BP1 TP53BP1 ASCC3 ASCC3 FANCI FANCI ERCC8 ERCC8 MSH3 MSH3 F6YW13_MONDO F6YW13_MONDO BRCA2 BRCA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DCLRE1CDNA cross-link repair 1C. (684 aa)
ASCC1Activating signal cointegrator 1 complex subunit 1. (400 aa)
PALB2PALB2_WD40 domain-containing protein. (1200 aa)
XRCC4X-ray repair cross complementing 4. (333 aa)
LIG4DNA ligase. (911 aa)
PAXXUncharacterized protein. (243 aa)
ZSWIM7Zinc finger SWIM-type containing 7. (140 aa)
PHF21APHD finger protein 21A. (683 aa)
ATMTAN domain-containing protein. (112 aa)
KDM1ALysine demethylase 1A. (909 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1840 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (420 aa)
MLH1MutL homolog 1. (731 aa)
PMS1PMS1 homolog 1, mismatch repair system component. (936 aa)
ASCC2Activating signal cointegrator 1 complex subunit 2. (781 aa)
PMS2PMS1 homolog 2, mismatch repair system component. (863 aa)
XPCXPC complex subunit, DNA damage recognition and repair factor. (927 aa)
SWSAP1Uncharacterized protein. (255 aa)
MLH3MutL homolog 3. (1475 aa)
FANCD2FA complementation group D2. (1419 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (897 aa)
XPAXPA, DNA damage recognition and repair factor. (275 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1584 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (969 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4010 aa)
ERCC1Uncharacterized protein. (436 aa)
RCOR1REST corepressor 1. (500 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (701 aa)
XRCC6X-ray repair cross complementing 6. (633 aa)
TP53BP1Tumor protein p53 binding protein 1. (1882 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (2210 aa)
FANCIFA complementation group I. (1332 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)
MSH3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1110 aa)
F6YW13_MONDODNA_MISMATCH_REPAIR_2 domain-containing protein. (641 aa)
BRCA2Tower domain-containing protein. (3324 aa)
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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