14 items (Monodelphis domestica) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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	SNRNP200	Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
	PDE6C	Phosphodiesterase. (861 aa)
	TXNL4A	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity). (273 aa)
	SNRPE	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
	F6ZCD8_MONDO	SFM domain-containing protein. (342 aa)
	SNRPD2	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (108 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
	PRPF18	SFM domain-containing protein. (351 aa)
	SNRPG	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
	PRPF8	Pre-mRNA processing factor 8. (2317 aa)
	DDX23	DEAD-box helicase 23. (818 aa)
	TXNL4B	Thioredoxin like 4B. (186 aa)
	F7AQ76_MONDO	Uncharacterized protein. (110 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX23	F6ZCD8_MONDO	ENSMODP00000012490	ENSMODP00000032706	DEAD-box helicase 23.	SFM domain-containing protein.	0.690
DDX23	F7AQ76_MONDO	ENSMODP00000012490	ENSMODP00000001762	DEAD-box helicase 23.	Uncharacterized protein.	0.960
DDX23	PRPF18	ENSMODP00000012490	ENSMODP00000021091	DEAD-box helicase 23.	SFM domain-containing protein.	0.690
DDX23	PRPF8	ENSMODP00000012490	ENSMODP00000013136	DEAD-box helicase 23.	Pre-mRNA processing factor 8.	0.998
DDX23	SNRNP200	ENSMODP00000012490	ENSMODP00000010540	DEAD-box helicase 23.	Small nuclear ribonucleoprotein U5 subunit 200.	0.995
DDX23	SNRPB	ENSMODP00000012490	ENSMODP00000049062	DEAD-box helicase 23.	Small nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity).	0.930
DDX23	SNRPD1	ENSMODP00000012490	ENSMODP00000026847	DEAD-box helicase 23.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.983
DDX23	SNRPD2	ENSMODP00000012490	ENSMODP00000026911	DEAD-box helicase 23.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.989
DDX23	SNRPE	ENSMODP00000012490	ENSMODP00000039018	DEAD-box helicase 23.	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.	0.962
DDX23	SNRPG	ENSMODP00000012490	ENSMODP00000014417	DEAD-box helicase 23.	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.	0.920
DDX23	TXNL4A	ENSMODP00000012490	ENSMODP00000054959	DEAD-box helicase 23.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.995
DDX23	TXNL4B	ENSMODP00000012490	ENSMODP00000003036	DEAD-box helicase 23.	Thioredoxin like 4B.	0.937
F6ZCD8_MONDO	DDX23	ENSMODP00000032706	ENSMODP00000012490	SFM domain-containing protein.	DEAD-box helicase 23.	0.690
F6ZCD8_MONDO	F7AQ76_MONDO	ENSMODP00000032706	ENSMODP00000001762	SFM domain-containing protein.	Uncharacterized protein.	0.565
F6ZCD8_MONDO	PRPF18	ENSMODP00000032706	ENSMODP00000021091	SFM domain-containing protein.	SFM domain-containing protein.	0.544
F6ZCD8_MONDO	PRPF8	ENSMODP00000032706	ENSMODP00000013136	SFM domain-containing protein.	Pre-mRNA processing factor 8.	0.931
F6ZCD8_MONDO	SNRNP200	ENSMODP00000032706	ENSMODP00000010540	SFM domain-containing protein.	Small nuclear ribonucleoprotein U5 subunit 200.	0.937
F6ZCD8_MONDO	SNRPB	ENSMODP00000032706	ENSMODP00000049062	SFM domain-containing protein.	Small nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity).	0.694
F6ZCD8_MONDO	SNRPD1	ENSMODP00000032706	ENSMODP00000026847	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.811
F6ZCD8_MONDO	SNRPD2	ENSMODP00000032706	ENSMODP00000026911	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.789