(44 nodes) Cytosolic small ribosomal subunit network (Monodelphis domestica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (293 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	RPS18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (149 aa)
	RPS16	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	RPS11	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
	RPS29	Uncharacterized protein. (54 aa)
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	RPS14	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	ENSMODP00000053951	Uncharacterized protein. (130 aa)
	RPS28	Uncharacterized protein. (69 aa)
	RPS17	Uncharacterized protein. (135 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	ENSMODP00000060477	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (85 aa)
	ENSMODP00000056525	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (117 aa)
	ENSMODP00000055579	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (140 aa)
	RPS29-2	Uncharacterized protein. (56 aa)
	RPS13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (184 aa)
	MCTS1	Malignant T-cell-amplified sequence. (201 aa)
	ENSMODP00000051738	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	RPS23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	RPS15	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	ENSMODP00000049411	Ribosomal_S17_N domain-containing protein. (160 aa)
	ENSMODP00000049402	S5 DRBM domain-containing protein. (163 aa)
	RPS20	Ribosomal_S10 domain-containing protein. (119 aa)
	ENSMODP00000049150	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	ENSMODP00000048537	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (111 aa)
	ENSMODP00000048023	Uncharacterized protein. (81 aa)
	ENSMODP00000046331	Uncharacterized protein. (70 aa)
	ENSMODP00000046223	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (114 aa)
	ENSMODP00000043793	Ubiquitin-like domain-containing protein. (104 aa)
	ENSMODP00000042094	Uncharacterized protein. (63 aa)
	ENSMODP00000041782	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (136 aa)
	RPS19	Ribosomal protein S19. (167 aa)
	F7E5N0_MONDO	Uncharacterized protein. (68 aa)
	F7EPG6_MONDO	Uncharacterized protein. (56 aa)
	F7D612_MONDO	Malignant T-cell-amplified sequence. (165 aa)
	RPS24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (202 aa)
	F7AXD9_MONDO	Uncharacterized protein. (56 aa)
	F6YIA3_MONDO	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (205 aa)
	H9H9J7_MONDO	Ribosomal_S7 domain-containing protein. (131 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1514 aa)
	F7FV67_MONDO	Ubiquitin-like domain-containing protein. (156 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX29	F7AXD9_MONDO	ENSMODP00000024309	ENSMODP00000035905	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Uncharacterized protein.	0.406
DHX29	F7E5N0_MONDO	ENSMODP00000024309	ENSMODP00000037829	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Uncharacterized protein.	0.519
DHX29	F7EPG6_MONDO	ENSMODP00000024309	ENSMODP00000037629	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Uncharacterized protein.	0.406
DHX29	F7FV67_MONDO	ENSMODP00000024309	ENSMODP00000022067	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ubiquitin-like domain-containing protein.	0.518
DHX29	FAU	ENSMODP00000024309	ENSMODP00000012644	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.495
DHX29	RPS11	ENSMODP00000024309	ENSMODP00000016802	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.534
DHX29	RPS13	ENSMODP00000024309	ENSMODP00000008782	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.520
DHX29	RPS14	ENSMODP00000024309	ENSMODP00000011855	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.567
DHX29	RPS16	ENSMODP00000024309	ENSMODP00000016951	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.495
DHX29	RPS18	ENSMODP00000024309	ENSMODP00000017765	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.554
DHX29	RPS19	ENSMODP00000024309	ENSMODP00000041022	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S19.	0.479
DHX29	RPS2	ENSMODP00000024309	ENSMODP00000020073	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.530
DHX29	RPS23	ENSMODP00000024309	ENSMODP00000049949	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.521
DHX29	RPS25	ENSMODP00000024309	ENSMODP00000016681	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.442
DHX29	RPS26	ENSMODP00000024309	ENSMODP00000027415	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.427
DHX29	RPS27A	ENSMODP00000024309	ENSMODP00000002220	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ubiquitin-like domain-containing protein.	0.518
DHX29	RPS28	ENSMODP00000024309	ENSMODP00000004765	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Uncharacterized protein.	0.519
DHX29	RPS29	ENSMODP00000024309	ENSMODP00000014228	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Uncharacterized protein.	0.406
DHX29	RPS7	ENSMODP00000024309	ENSMODP00000018111	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.592
ENSMODP00000041782	ENSMODP00000042094	ENSMODP00000041782	ENSMODP00000042094	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.938