(8 nodes) TBP domain superfamily network (Monodelphis domestica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBPL2	TATA-box binding protein like 2. (342 aa)
	COPG1	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
	AP2B1	AP complex subunit beta. (951 aa)
	TBPL1	TATA-box binding protein like 1. (186 aa)
	AP1B1	AP complex subunit beta. (956 aa)
	COPG2	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (893 aa)
	AP4B1	AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (738 aa)
	TBP	TATA-box binding protein. (308 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1B1	AP2B1	ENSMODP00000011033	ENSMODP00000023872	AP complex subunit beta.	AP complex subunit beta.	0.492
AP1B1	AP4B1	ENSMODP00000011033	ENSMODP00000000838	AP complex subunit beta.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.611
AP2B1	AP1B1	ENSMODP00000023872	ENSMODP00000011033	AP complex subunit beta.	AP complex subunit beta.	0.492
AP2B1	AP4B1	ENSMODP00000023872	ENSMODP00000000838	AP complex subunit beta.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.581
AP4B1	AP1B1	ENSMODP00000000838	ENSMODP00000011033	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP complex subunit beta.	0.611
AP4B1	AP2B1	ENSMODP00000000838	ENSMODP00000023872	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP complex subunit beta.	0.581
COPG1	COPG2	ENSMODP00000010354	ENSMODP00000018122	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.544
COPG2	COPG1	ENSMODP00000018122	ENSMODP00000010354	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.544
TBP	TBPL1	ENSMODP00000006780	ENSMODP00000021852	TATA-box binding protein.	TATA-box binding protein like 1.	0.915
TBP	TBPL2	ENSMODP00000006780	ENSMODP00000009348	TATA-box binding protein.	TATA-box binding protein like 2.	0.902
TBPL1	TBP	ENSMODP00000021852	ENSMODP00000006780	TATA-box binding protein like 1.	TATA-box binding protein.	0.915
TBPL1	TBPL2	ENSMODP00000021852	ENSMODP00000009348	TATA-box binding protein like 1.	TATA-box binding protein like 2.	0.916
TBPL2	TBP	ENSMODP00000009348	ENSMODP00000006780	TATA-box binding protein like 2.	TATA-box binding protein.	0.902
TBPL2	TBPL1	ENSMODP00000009348	ENSMODP00000021852	TATA-box binding protein like 2.	TATA-box binding protein like 1.	0.916