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NUP42 NUP42 LOC100011364 LOC100011364 RANBP2 RANBP2 GEMIN8 GEMIN8 LOC100016082 LOC100016082 SNRPD3 SNRPD3 ENSMODP00000055832 ENSMODP00000055832 ENSMODP00000052381 ENSMODP00000052381 ENSMODP00000050660 ENSMODP00000050660 ENSMODP00000049274 ENSMODP00000049274 SNRPB SNRPB LOC100015414 LOC100015414 GEMIN7 GEMIN7 SEH1L SEH1L ENSMODP00000045582 ENSMODP00000045582 NUP153 NUP153 NUP188 NUP188 WDR77 WDR77 NUP35 NUP35 ENSMODP00000043292 ENSMODP00000043292 GEMIN2 GEMIN2 NUP54 NUP54 ENSMODP00000041492 ENSMODP00000041492 SNRPE SNRPE F6YM05_MONDO F6YM05_MONDO NUP43 NUP43 F7BY57_MONDO F7BY57_MONDO GEMIN4 GEMIN4 SNRPD2 SNRPD2 SNRPD1 SNRPD1 NDC1 NDC1 NUP155 NUP155 NUP160 NUP160 F6SMU4_MONDO F6SMU4_MONDO F7FV97_MONDO F7FV97_MONDO RAE1 RAE1 NUP205 NUP205 LOC100029343 LOC100029343 NUP93 NUP93 NUP214 NUP214 TPR TPR SNRPG SNRPG TGS1 TGS1 NUP133 NUP133 SNUPN SNUPN GEMIN6 GEMIN6 NUP58 NUP58 NUP210 NUP210 GEMIN5 GEMIN5 NUP98 NUP98 SNRPF SNRPF NUP107 NUP107 NUP85 NUP85 NUP50 NUP50 SEC13 SEC13 PRMT5 PRMT5 CLNS1A CLNS1A NUP37 NUP37 DDX20 DDX20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP42Nucleoporin 42. (446 aa)
LOC100011364Tudor domain-containing protein. (288 aa)
RANBP2RAN binding protein 2. (2950 aa)
GEMIN8Uncharacterized protein. (235 aa)
LOC100016082Nsp1_C domain-containing protein. (527 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
ENSMODP00000055832Sm domain-containing protein. (62 aa)
ENSMODP00000052381Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (73 aa)
ENSMODP00000050660Nsp1_C domain-containing protein. (589 aa)
ENSMODP00000049274Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (52 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity). (273 aa)
LOC100015414Nsp1_C domain-containing protein. (754 aa)
GEMIN7Gem nuclear organelle associated protein 7. (133 aa)
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (426 aa)
ENSMODP00000045582WD_REPEATS_REGION domain-containing protein. (129 aa)
NUP153Nucleoporin 153. (1403 aa)
NUP188Nucleoporin 188. (1758 aa)
WDR77WD repeat domain 77. (432 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (325 aa)
ENSMODP00000043292Uncharacterized protein. (151 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (264 aa)
NUP54Nucleoporin 54. (558 aa)
ENSMODP00000041492Nsp1_C domain-containing protein. (198 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
F6YM05_MONDONuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (921 aa)
NUP43WD_REPEATS_REGION domain-containing protein. (379 aa)
F7BY57_MONDOUncharacterized protein. (190 aa)
GEMIN4Gem nuclear organelle associated protein 4. (1060 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (108 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
NDC1NDC1 transmembrane nucleoporin. (701 aa)
NUP155Nucleoporin 155. (1396 aa)
NUP160Nucleoporin 160. (1401 aa)
F6SMU4_MONDOBIG2 domain-containing protein. (668 aa)
F7FV97_MONDOUncharacterized protein. (120 aa)
RAE1Ribonucleic acid export 1. (368 aa)
NUP205Nucleoporin 205. (2017 aa)
LOC100029343Uncharacterized protein. (1241 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (882 aa)
NUP214Nucleoporin 214. (1989 aa)
TPRTranslocated promoter region, nuclear basket protein. (2364 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
TGS1Trimethylguanosine synthase 1. (869 aa)
NUP133Nucleoporin 133. (1154 aa)
SNUPNSnurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family. (358 aa)
GEMIN6Gem nuclear organelle associated protein 6. (166 aa)
NUP58Nucleoporin 58. (602 aa)
NUP210Nucleoporin 210. (1899 aa)
GEMIN5Gem nuclear organelle associated protein 5. (1511 aa)
NUP98Nucleoporin 98. (1816 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (86 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (914 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (647 aa)
NUP50Nucleoporin 50. (487 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (321 aa)
PRMT5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (637 aa)
CLNS1AUncharacterized protein. (238 aa)
NUP37Nucleoporin 37. (326 aa)
DDX20DEAD-box helicase 20. (829 aa)
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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