18 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PPARD	Peroxisome proliferator activated receptor delta. (441 aa)
	PDK2	Protein-serine/threonine kinase. (407 aa)
	F7EYJ1_MONDO	Protein-serine/threonine kinase. (396 aa)
	PDK1	Protein-serine/threonine kinase. (427 aa)
	PDK3	Protein-serine/threonine kinase. (415 aa)
	PDHB	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (371 aa)
	DLAT	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (643 aa)
	PDP2	Pyruvate dehyrogenase phosphatase catalytic subunit 2. (608 aa)
	PDK4	Protein-serine/threonine kinase. (423 aa)
	PDPR	Pyruvate dehydrogenase phosphatase regulatory subunit. (886 aa)
	ENSMODP00000051781	Pyr_redox_2 domain-containing protein. (132 aa)
	ENSMODP00000049451	E1_dh domain-containing protein. (101 aa)
	PDHA1	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (411 aa)
	PDP1	PPM-type phosphatase domain-containing protein. (696 aa)
	GSTZ1	Glutathione S-transferase zeta 1; Belongs to the GST superfamily. (260 aa)
	K7E0Z8_MONDO	Protein-serine/threonine kinase. (267 aa)
	PDHX	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (498 aa)
	DLD	Dihydrolipoyl dehydrogenase. (468 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLAT	DLD	ENSMODP00000043242	ENSMODP00000020394	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Dihydrolipoyl dehydrogenase.	0.999
DLAT	ENSMODP00000049451	ENSMODP00000043242	ENSMODP00000049451	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	E1_dh domain-containing protein.	0.951
DLAT	ENSMODP00000051781	ENSMODP00000043242	ENSMODP00000051781	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyr_redox_2 domain-containing protein.	0.982
DLAT	F7EYJ1_MONDO	ENSMODP00000043242	ENSMODP00000011372	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Protein-serine/threonine kinase.	0.636
DLAT	K7E0Z8_MONDO	ENSMODP00000043242	ENSMODP00000039449	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Protein-serine/threonine kinase.	0.715
DLAT	PDHA1	ENSMODP00000043242	ENSMODP00000047056	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.997
DLAT	PDHB	ENSMODP00000043242	ENSMODP00000002919	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.999
DLAT	PDHX	ENSMODP00000043242	ENSMODP00000034308	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.992
DLAT	PDK1	ENSMODP00000043242	ENSMODP00000011266	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Protein-serine/threonine kinase.	0.715
DLAT	PDK2	ENSMODP00000043242	ENSMODP00000015067	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Protein-serine/threonine kinase.	0.933
DLAT	PDK3	ENSMODP00000043242	ENSMODP00000009219	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Protein-serine/threonine kinase.	0.945
DLAT	PDK4	ENSMODP00000043242	ENSMODP00000058442	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Protein-serine/threonine kinase.	0.715
DLAT	PDP1	ENSMODP00000043242	ENSMODP00000044290	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	PPM-type phosphatase domain-containing protein.	0.615
DLAT	PDP2	ENSMODP00000043242	ENSMODP00000060263	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehyrogenase phosphatase catalytic subunit 2.	0.615
DLAT	PDPR	ENSMODP00000043242	ENSMODP00000052473	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehydrogenase phosphatase regulatory subunit.	0.617
DLAT	PPARD	ENSMODP00000043242	ENSMODP00000017227	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Peroxisome proliferator activated receptor delta.	0.473
DLD	DLAT	ENSMODP00000020394	ENSMODP00000043242	Dihydrolipoyl dehydrogenase.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.999
DLD	ENSMODP00000049451	ENSMODP00000020394	ENSMODP00000049451	Dihydrolipoyl dehydrogenase.	E1_dh domain-containing protein.	0.918
DLD	F7EYJ1_MONDO	ENSMODP00000020394	ENSMODP00000011372	Dihydrolipoyl dehydrogenase.	Protein-serine/threonine kinase.	0.505
DLD	K7E0Z8_MONDO	ENSMODP00000020394	ENSMODP00000039449	Dihydrolipoyl dehydrogenase.	Protein-serine/threonine kinase.	0.542