35 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHD5	CHDCT2 domain-containing protein. (387 aa)
	MTA3	Metastasis associated 1 family member 3. (609 aa)
	SAP30	Sin3A associated protein 30. (229 aa)
	F7CAC4_MONDO	Uncharacterized protein. (1104 aa)
	GPS2	G protein pathway suppressor 2. (325 aa)
	HMG20B	High mobility group 20B. (323 aa)
	GATAD2A	GATA zinc finger domain containing 2A. (626 aa)
	ARID4A	AT-rich interaction domain 4A. (1280 aa)
	SAP18	Sin3A associated protein 18. (172 aa)
	ARID4B	AT-rich interaction domain 4B. (1309 aa)
	PHF21B	PHD finger protein 21B. (495 aa)
	F6RKH2_MONDO	Uncharacterized protein. (467 aa)
	HMG20A	High mobility group 20A. (347 aa)
	BRMS1L	BRMS1 like transcriptional repressor. (323 aa)
	SUDS3	SDS3 homolog, SIN3A corepressor complex component. (327 aa)
	KDM1A	Lysine demethylase 1A. (909 aa)
	REST	RE1 silencing transcription factor. (973 aa)
	RCOR1	REST corepressor 1. (500 aa)
	ENSMODP00000052023	WD_REPEATS_REGION domain-containing protein. (411 aa)
	ENSMODP00000050219	Uncharacterized protein. (164 aa)
	NCOR1	Nuclear receptor corepressor 1. (2417 aa)
	ENSMODP00000049352	Uncharacterized protein. (145 aa)
	RCOR3	REST corepressor 3. (571 aa)
	MTA1	Metastasis associated 1. (718 aa)
	WDR26	WD repeat domain 26. (907 aa)
	LOC100018407	WD_REPEATS_REGION domain-containing protein. (427 aa)
	CHD3	Chromodomain helicase DNA binding protein 3. (1946 aa)
	PHF21A	PHD finger protein 21A. (683 aa)
	WDR73	WD repeat domain 73. (400 aa)
	CHD4	Uncharacterized protein. (1851 aa)
	HDAC2	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (488 aa)
	HDAC1	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (450 aa)
	RBBP4	RB binding protein 4, chromatin remodeling factor. (425 aa)
	GATAD2B	GATA zinc finger domain containing 2B. (596 aa)
	RBBP7	RB binding protein 7, chromatin remodeling factor. (425 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSMODP00000009804	ENSMODP00000010471	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.736
ARID4A	BRMS1L	ENSMODP00000009804	ENSMODP00000015953	AT-rich interaction domain 4A.	BRMS1 like transcriptional repressor.	0.984
ARID4A	CHD3	ENSMODP00000009804	ENSMODP00000042655	AT-rich interaction domain 4A.	Chromodomain helicase DNA binding protein 3.	0.596
ARID4A	CHD4	ENSMODP00000009804	ENSMODP00000022561	AT-rich interaction domain 4A.	Uncharacterized protein.	0.596
ARID4A	CHD5	ENSMODP00000009804	ENSMODP00000051901	AT-rich interaction domain 4A.	CHDCT2 domain-containing protein.	0.596
ARID4A	ENSMODP00000049352	ENSMODP00000009804	ENSMODP00000049352	AT-rich interaction domain 4A.	Uncharacterized protein.	0.931
ARID4A	ENSMODP00000050219	ENSMODP00000009804	ENSMODP00000050219	AT-rich interaction domain 4A.	Uncharacterized protein.	0.931
ARID4A	ENSMODP00000052023	ENSMODP00000009804	ENSMODP00000052023	AT-rich interaction domain 4A.	WD_REPEATS_REGION domain-containing protein.	0.872
ARID4A	F6RKH2_MONDO	ENSMODP00000009804	ENSMODP00000014282	AT-rich interaction domain 4A.	Uncharacterized protein.	0.596
ARID4A	F7CAC4_MONDO	ENSMODP00000009804	ENSMODP00000007809	AT-rich interaction domain 4A.	Uncharacterized protein.	0.596
ARID4A	GATAD2A	ENSMODP00000009804	ENSMODP00000008912	AT-rich interaction domain 4A.	GATA zinc finger domain containing 2A.	0.663
ARID4A	GATAD2B	ENSMODP00000009804	ENSMODP00000021635	AT-rich interaction domain 4A.	GATA zinc finger domain containing 2B.	0.663
ARID4A	HDAC1	ENSMODP00000009804	ENSMODP00000021783	AT-rich interaction domain 4A.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.898
ARID4A	HDAC2	ENSMODP00000009804	ENSMODP00000022264	AT-rich interaction domain 4A.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.898
ARID4A	HMG20A	ENSMODP00000009804	ENSMODP00000015169	AT-rich interaction domain 4A.	High mobility group 20A.	0.416
ARID4A	HMG20B	ENSMODP00000009804	ENSMODP00000008532	AT-rich interaction domain 4A.	High mobility group 20B.	0.416
ARID4A	KDM1A	ENSMODP00000009804	ENSMODP00000020160	AT-rich interaction domain 4A.	Lysine demethylase 1A.	0.655
ARID4A	LOC100018407	ENSMODP00000009804	ENSMODP00000044284	AT-rich interaction domain 4A.	WD_REPEATS_REGION domain-containing protein.	0.872
ARID4A	MTA1	ENSMODP00000009804	ENSMODP00000047970	AT-rich interaction domain 4A.	Metastasis associated 1.	0.685
ARID4A	MTA3	ENSMODP00000009804	ENSMODP00000000450	AT-rich interaction domain 4A.	Metastasis associated 1 family member 3.	0.668