STRINGSTRING
TAF9 TAF9 ELOA ELOA POLR2E POLR2E GTF2H1 GTF2H1 SUPT16H SUPT16H ELOC ELOC POLR2A POLR2A TBPL2 TBPL2 GTF2H5 GTF2H5 MNAT1 MNAT1 F7CPH0_MONDO F7CPH0_MONDO F7CPG0_MONDO F7CPG0_MONDO F7FNJ8_MONDO F7FNJ8_MONDO LOC100012206 LOC100012206 TAF5 TAF5 RTF1 RTF1 F6VUC1_MONDO F6VUC1_MONDO CCNT2 CCNT2 LOC100010571 LOC100010571 MLLT1 MLLT1 F6WG96_MONDO F6WG96_MONDO GTF2F1 GTF2F1 LEO1 LEO1 TAF13 TAF13 F6YD76_MONDO F6YD76_MONDO MLLT3 MLLT3 GTF2A1 GTF2A1 TAF2 TAF2 F6VW37_MONDO F6VW37_MONDO NELFA NELFA TAF6 TAF6 TBP TBP GTF2A2 GTF2A2 WDR61 WDR61 AFF1 AFF1 LOC100015833 LOC100015833 POLR2B POLR2B CDK9 CDK9 POLR2G POLR2G POLR2H POLR2H CCNT1 CCNT1 CCNH CCNH ENSMODP00000044533 ENSMODP00000044533 PRF1 PRF1 ENSMODP00000045507 ENSMODP00000045507 SUPT4H1 SUPT4H1 ENSMODP00000046196 ENSMODP00000046196 TAF7L TAF7L CTDP1 CTDP1 ENSMODP00000047085 ENSMODP00000047085 ENSMODP00000047510 ENSMODP00000047510 ENSMODP00000048085 ENSMODP00000048085 ENSMODP00000048466 ENSMODP00000048466 ENSMODP00000049916 ENSMODP00000049916 ENSMODP00000050031 ENSMODP00000050031 ENSMODP00000050173 ENSMODP00000050173 NCBP1 NCBP1 TAF11 TAF11 TCEANC2 TCEANC2 IWS1 IWS1 ENSMODP00000052137 ENSMODP00000052137 ENSMODP00000053666 ENSMODP00000053666 ENSMODP00000053683 ENSMODP00000053683 TAF1 TAF1 ENSMODP00000055602 ENSMODP00000055602 C2H6orf15 C2H6orf15 TAF3 TAF3 ENSMODP00000056448 ENSMODP00000056448 ENSMODP00000056547 ENSMODP00000056547 ENSMODP00000056929 ENSMODP00000056929 ENSMODP00000057623 ENSMODP00000057623 ENSMODP00000057641 ENSMODP00000057641 ELL ELL ENSMODP00000058852 ENSMODP00000058852 GTF2F2 GTF2F2 AFF4 AFF4 TAF12 TAF12 ENSMODP00000059568 ENSMODP00000059568 ENSMODP00000059578 ENSMODP00000059578 POLR2K POLR2K TCEANC TCEANC F6WP01_MONDO F6WP01_MONDO F6WNY8_MONDO F6WNY8_MONDO F6VDP4_MONDO F6VDP4_MONDO F6PQN5_MONDO F6PQN5_MONDO F6PQP3_MONDO F6PQP3_MONDO F6ZW75_MONDO F6ZW75_MONDO LOC100032661 LOC100032661 F7E8G5_MONDO F7E8G5_MONDO GTF2H3 GTF2H3 TAF7 TAF7 F6WPH3_MONDO F6WPH3_MONDO LOC100027785 LOC100027785 ERCC2 ERCC2 TAF4B TAF4B CTR9 CTR9 F7G7Q2_MONDO F7G7Q2_MONDO SSRP1 SSRP1 CDK7 CDK7 SUPT6H SUPT6H TAF15 TAF15 POLR2F POLR2F GTF2E2 GTF2E2 F6ZN30_MONDO F6ZN30_MONDO ERCC3 ERCC3 POLR2D POLR2D TAF10 TAF10 EAF2 EAF2 GTF2E1 GTF2E1 TBPL1 TBPL1 NELFB NELFB TCEA2 TCEA2 TAF4 TAF4 NELFCD NELFCD ELOB ELOB TCEA3 TCEA3 NCBP2 NCBP2 GTF2H4 GTF2H4 NELFE NELFE F7FIQ6_MONDO F7FIQ6_MONDO EAF1 EAF1 POLR2I POLR2I F6WNH5_MONDO F6WNH5_MONDO F6WNG8_MONDO F6WNG8_MONDO F6SB62_MONDO F6SB62_MONDO SUPT5H SUPT5H ENSMODP00000047607 ENSMODP00000047607 F7AM90_MONDO F7AM90_MONDO CDC73 CDC73 GTF2B GTF2B F6WNI1_MONDO F6WNI1_MONDO LOC100010993 LOC100010993 F6UVW9_MONDO F6UVW9_MONDO POLR2J POLR2J POLR2C POLR2C PAF1 PAF1 CINP CINP CCNK CCNK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF9Uncharacterized protein. (327 aa)
ELOATFIIS N-terminal domain-containing protein. (775 aa)
POLR2ERNA polymerase II subunit E. (221 aa)
GTF2H1Uncharacterized protein. (548 aa)
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (1047 aa)
ELOCSkp1_POZ domain-containing protein; Belongs to the SKP1 family. (126 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
TBPL2TATA-box binding protein like 2. (342 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
F7CPH0_MONDOUncharacterized protein. (272 aa)
F7CPG0_MONDOUncharacterized protein. (263 aa)
F7FNJ8_MONDOTAFII28 domain-containing protein. (207 aa)
LOC100012206Uncharacterized protein. (344 aa)
TAF5TATA-box binding protein associated factor 5. (825 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (709 aa)
F6VUC1_MONDOUncharacterized protein. (301 aa)
CCNT2Uncharacterized protein; Belongs to the cyclin family. (731 aa)
LOC100010571General transcription factor IIH subunit. (395 aa)
MLLT1MLLT1 super elongation complex subunit. (556 aa)
F6WG96_MONDOTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (243 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (243 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (668 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
F6YD76_MONDOUncharacterized protein. (527 aa)
MLLT3AHD domain-containing protein. (163 aa)
GTF2A1General transcription factor IIA subunit 1. (377 aa)
TAF2TATA-box binding protein associated factor 2. (1209 aa)
F6VW37_MONDOUncharacterized protein. (248 aa)
NELFANegative elongation factor complex member A. (541 aa)
TAF6TATA-box binding protein associated factor 6. (679 aa)
TBPTATA-box binding protein. (308 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
WDR61WD repeat domain 61. (305 aa)
AFF1AF4/FMR2 family member 1. (1215 aa)
LOC100015833General transcription factor IIH subunit. (403 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
CDK9Cyclin dependent kinase 9. (508 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
CCNT1Cyclin T1. (590 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
ENSMODP00000044533BSD domain-containing protein. (232 aa)
PRF1Perforin 1. (559 aa)
ENSMODP00000045507TFIID_20kDa domain-containing protein. (202 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ENSMODP00000046196Uncharacterized protein. (84 aa)
TAF7LTAFII55_N domain-containing protein. (367 aa)
CTDP1CTD phosphatase subunit 1. (1047 aa)
ENSMODP00000047085annotation not available (142 aa)
ENSMODP00000047510Uncharacterized protein. (206 aa)
ENSMODP00000048085Uncharacterized protein. (79 aa)
ENSMODP00000048466Uncharacterized protein. (86 aa)
ENSMODP00000049916TFIIS N-terminal domain-containing protein. (748 aa)
ENSMODP00000050031Uncharacterized protein. (80 aa)
ENSMODP00000050173Uncharacterized protein. (75 aa)
NCBP1Nuclear cap binding protein subunit 1. (794 aa)
TAF11TAFII28 domain-containing protein. (224 aa)
TCEANC2Uncharacterized protein. (208 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (945 aa)
ENSMODP00000052137Uncharacterized protein. (85 aa)
ENSMODP00000053666Uncharacterized protein. (76 aa)
ENSMODP00000053683Uncharacterized protein. (399 aa)
TAF1Transcription initiation factor TFIID subunit. (1941 aa)
ENSMODP00000055602Uncharacterized protein. (451 aa)
C2H6orf15Uncharacterized protein. (359 aa)
TAF3TATA-box binding protein associated factor 3. (971 aa)
ENSMODP00000056448annotation not available (142 aa)
ENSMODP00000056547Uncharacterized protein. (88 aa)
ENSMODP00000056929CYCLIN domain-containing protein; Belongs to the cyclin family. (172 aa)
ENSMODP00000057623annotation not available (142 aa)
ENSMODP00000057641annotation not available (142 aa)
ELLElongation factor for RNA polymerase II. (629 aa)
ENSMODP00000058852Uncharacterized protein. (820 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
AFF4AF4/FMR2 family member 4. (1198 aa)
TAF12TFIID_20kDa domain-containing protein. (213 aa)
ENSMODP00000059568annotation not available (142 aa)
ENSMODP00000059578RPOL4c domain-containing protein. (104 aa)
POLR2KUncharacterized protein. (58 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (357 aa)
F6WP01_MONDORPOL4c domain-containing protein. (142 aa)
F6WNY8_MONDORPOL4c domain-containing protein. (142 aa)
F6VDP4_MONDOTranscription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (105 aa)
F6PQN5_MONDONuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
F6PQP3_MONDONuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (155 aa)
F6ZW75_MONDOTAFII28 domain-containing protein. (206 aa)
LOC100032661Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
F7E8G5_MONDOCYCLIN domain-containing protein; Belongs to the cyclin family. (246 aa)
GTF2H3General transcription factor IIH subunit 3. (304 aa)
TAF7TAFII55_N domain-containing protein. (346 aa)
F6WPH3_MONDOCYCLIN domain-containing protein; Belongs to the cyclin family. (238 aa)
LOC100027785Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (760 aa)
TAF4BTATA-box binding protein associated factor 4b. (978 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1183 aa)
F7G7Q2_MONDOUncharacterized protein. (302 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (712 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
TAF15TATA-box binding protein associated factor 15. (494 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
F6ZN30_MONDOTFIIS N-terminal domain-containing protein. (623 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (783 aa)
POLR2DRPOL4c domain-containing protein. (142 aa)
TAF10TATA-box binding protein associated factor 10. (223 aa)
EAF2ELL associated factor 2. (262 aa)
GTF2E1General transcription factor IIE subunit 1. (446 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
NELFBNegative elongation factor complex member B. (580 aa)
TCEA2Transcription elongation factor A2. (306 aa)
TAF4TAFH domain-containing protein. (1113 aa)
NELFCDNegative elongation factor complex member C/D. (592 aa)
ELOBUbiquitin-like domain-containing protein. (113 aa)
TCEA3Transcription elongation factor A3. (336 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (477 aa)
NELFENegative elongation factor complex member E. (400 aa)
F7FIQ6_MONDOTFIIF_beta_N domain-containing protein. (255 aa)
EAF1ELL associated factor 1. (259 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
F6WNH5_MONDORPOL4c domain-containing protein. (142 aa)
F6WNG8_MONDORPOL4c domain-containing protein. (142 aa)
F6SB62_MONDOUbiquitin-like domain-containing protein. (100 aa)
SUPT5HTranscription elongation factor SPT5. (1041 aa)
ENSMODP00000047607Uncharacterized protein. (60 aa)
F7AM90_MONDOTAFH domain-containing protein. (597 aa)
CDC73CDC73_N domain-containing protein. (371 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
F6WNI1_MONDORPOL4c domain-containing protein. (142 aa)
LOC100010993Uncharacterized protein. (301 aa)
F6UVW9_MONDOUncharacterized protein. (215 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
PAF1Uncharacterized protein. (551 aa)
CINPCyclin dependent kinase 2 interacting protein. (211 aa)
CCNKCyclin K; Belongs to the cyclin family. (580 aa)
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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